Georhizobium profundi: D5400_02440
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Entry
D5400_02440 CDS
T05798
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
abaw
Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abaw03400
]
D5400_02440 (addB)
Enzymes [BR:
abaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5400_02440 (addB)
DNA repair and recombination proteins [BR:
abaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D5400_02440 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AZN70287
UniProt:
A0A3Q8XNT3
LinkDB
All DBs
Position
complement(505885..509067)
Genome browser
AA seq
1060 aa
AA seq
DB search
MAATMQKRLFTIPPGAPLLRILAESLCAGDLVPGFRYDPNDPLSLARATIYLPTRRAVRS
LRSEFVDVVGTGSAILPTLKALGELDEDGGFFDAEMPATLDLAPPIGSVEAVLELASLVE
RWKAALPAALGDGRFDSLVVPATPADAVWLARDLRDLIDAMGTHGGDWAALDALEAADFG
TWWQLTLEFMKIARSFWPARLGELSRSDPALHRNAAMSAEIARMLANPPDGPVIVAGSTG
SIPATADLIAAIATLEHGAVIFPGLDLGIADDIWPLVGGEAGLLSDPAVAAHPQFGLSRL
LDRLDAAREMVTPLGDISDTIAARNRLVSTALLPAQATDHWHGVGAVDPAAFAGVTVIEA
GGEREEATALAVAMRLAAENPKQRVALVTPDRNLARRVSIELRRFGIEANDSGGLPLSST
PQGTLLRLLLDTVMEPGDPVALTALLGHPLARFGMEPDEKRRAASIFERIALRGTLGDVD
VTALTALLDAEATTRSERRHQPAWRRRISDEDVAAARVMTLRVEAAVAPLAGRFARFLTS
RRADAAPGRLTIAQWAELTARVLEGVAADDRGELGNLWGGEAGSKLAGLFADLIAARAEI
SADGTDWADIAAAFLAGEIVKPDVTAHPRIFIWGALEARLQDVDTLLLAGLNEGSWPQRP
GQDPFLSRPMKASIGLEPPERRIGLAAHDFQMALGAKNVVLSRSTRSGGAPTVASRWLQR
LLAVAGETEAAAMRLRGAQILAQAALLDHREPVPQASRPEPRPPLEAQPKRYSFSEVKTL
RRDPYAIYARKVLRLDPLAELIRDPGVAERGTLYHEVLETFISRCPDIDHPDADLLLESI
ADECFAAQRLPHHVEVLWRPRFDHVARHWLEWERQRNGEIAERHTELHAEIPVRQTGVLL
SGIADRVDLREDGTVDIIDFKSGTEPSRKQARSLLDPQLPLEAAALLDGGFKRVGPRTPN
SLKYVRLKPSDRLLVDELEGKDRRSANSADDGTHMSAADLGMQSLDRLAGFIAVLQTGRR
GFASRIIPAKARDYGGEYDHLARVAEWANGDADDEEGGEA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaccatgcagaagcgtctcttcacgattccccccggtgcgccgctcctgcgc
atcctcgccgagagcctttgtgccggcgatctcgtgccgggtttccgctatgacccgaac
gatccgctgtcgctggcgcgcgcgacgatttacctccccacaaggcgcgccgtgcggtcg
ttgcgctccgaattcgtagatgtcgtcggaacgggcagcgccatcctgccgacgttgaag
gcgctcggcgaactggatgaggatggcggctttttcgatgccgagatgcccgcgacactc
gatctcgcgcccccgatcggctccgtcgaggcggtgttggagctcgcaagcctcgttgaa
cgctggaaagcggcactgccggcagcccttggcgacggccgcttcgattcgctggtcgtg
ccggcaacgcccgccgatgcggtgtggttggcgcgcgatctgcgcgatctcatcgatgca
atgggcacgcatggcggcgactgggcggcgctcgatgcgctggaggcggcggatttcggc
acctggtggcagctcacgctcgaattcatgaagatcgcccgcagcttctggccagcgcgg
cttggagaactcagccgttccgatccggcgctgcaccgcaacgcagcgatgtcggccgaa
atcgcgcgcatgcttgccaatccgccagacgggcccgtcatcgtcgccgggtcgaccggc
tcgatcccggcgacggcagacctcattgccgccattgcgacgctggagcacggcgccgtc
atctttcccggcctcgatctcggcattgcggatgacatctggccgctggtcggcggagag
gccgggctgttgtccgacccggcggtcgcagcgcatcctcaatttggtctcagccgtctc
ctcgaccggctcgacgctgcgcgtgagatggtgacgccgctcggcgatatatccgacacg
atcgccgcgcggaaccggctggtttcaacggcgcttctgcccgcccaggccaccgatcac
tggcacggggtcggcgcggtcgatcctgccgccttcgcaggcgtgacggtcatcgaagca
ggcggcgaacgcgaagaagcgacggcgctggccgtggcgatgcggctggcggcggaaaat
ccgaaacagcgcgtggcgctcgtcaccccggatcgcaatctcgcccgccgcgtgtcgatc
gagcttcgccgtttcggtatcgaagcgaacgattccggcggcttgccgctgtcctcgacg
ccccaaggcacgttgctgcggctcttgctcgataccgtcatggaacccggcgatccggtc
gcgctgacggcgctgctcggccatccgctggcccgcttcggcatggagcctgatgaaaag
cgccgggcagccagcatcttcgagcgcattgccctgcgtggcacgcttggcgatgtcgat
gtcactgcgttgacggcactgctggatgctgaggctacgacccggtcggagcgccgacac
cagcctgcatggcgacgtcgcatctccgatgaggacgttgcggccgcccgcgtgatgacg
ctgcgcgtggaagcggcggtggcgccgcttgccggccgcttcgcacgcttcttgaccagc
cgccgcgccgatgccgctcctggacggctgacgattgcgcaatgggcggagttgaccgcg
cgggtgctggaaggcgtcgctgccgatgatcggggcgaactcggcaatctctggggcggc
gaggcggggagcaaactggcaggactttttgccgatctcatcgcggcgcgtgctgaaatc
tctgcggacggcaccgactgggctgatattgcagccgcgtttctcgccggcgagatcgtg
aagccggatgtgacggctcacccgcgcatcttcatctggggcgcgctcgaggcgcggctg
caggatgtcgacacgctgctgcttgctggcttgaacgaaggctcctggccgcagcggccg
ggccaggatccgtttctgtcgcgaccgatgaaggcgtcgatcgggcttgagccgcccgaa
cgccggatcggcttggctgcccatgattttcagatggcgctcggggcaaaaaacgtcgtt
ctcagccgatcgacccgctccggcggcgcgccgaccgtcgcttcgcgctggctgcaacgg
ctgcttgcggttgcgggtgagaccgaggcggctgcgatgcgcctgcgcggagcccagata
cttgcgcaggcagcgcttctcgatcaccgcgagcccgtgccgcaggcatcacggccagaa
ccgcgtccgcccctggaagcccagcccaagcgctactccttcagcgaagtgaagacgctg
cggcgtgatccctacgcaatctatgcccgcaaggtgctccgtctcgaccccctggccgag
ctcattcgcgatccgggcgtggccgagcggggaacgctttatcacgaggttctggaaacc
ttcatcagccgctgccccgacatcgatcatcccgatgccgatctgctgctggaaagcatt
gccgacgagtgcttcgccgcccagcgcctgccgcatcatgtcgaggtcctgtggcgcccg
cgcttcgatcacgtggcgcgccactggctcgaatgggagcggcagcgaaacggagagatt
gccgagcgccatacggagctgcacgcggagatcccggttcggcagaccggcgtgcttttg
tccggcatagccgaccgcgtggatctgcgcgaagatggcaccgtcgatatcatcgatttc
aagtcgggcacggagccgtcgcgcaagcaggcgcgcagtcttctcgatccgcaattgccg
cttgaagccgcagcccttctcgatggtggcttcaagcgcgtcggcccacgaaccccgaac
tcactgaaatatgtgcgcctcaagccttccgaccgattgctggtcgatgagttggagggc
aaggaccgccgcagtgccaattccgccgatgacgggacccatatgagcgcggccgatctc
ggcatgcagtcgctcgatcggttagccggcttcatagctgtgctccaaaccggccggcgt
gggttcgcttcacgcatcattcccgccaaggcccgcgactatggaggcgagtacgaccat
ctcgcgcgtgtcgccgagtgggccaatggcgacgcggacgatgaagagggaggtgaagca
tga
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