Georhizobium profundi: D5400_08485
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Entry
D5400_08485 CDS
T05798
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abaw
Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abaw03032
]
D5400_08485
03400 DNA repair and recombination proteins [BR:
abaw03400
]
D5400_08485
Enzymes [BR:
abaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D5400_08485
DNA replication proteins [BR:
abaw03032
]
Prokaryotic type
DNA Topoisomerases
D5400_08485
DNA repair and recombination proteins [BR:
abaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D5400_08485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AZN71299
UniProt:
A0A3Q8XMX5
LinkDB
All DBs
Position
complement(1810149..1811198)
Genome browser
AA seq
349 aa
AA seq
DB search
MIERISAEEHAKAARLIYVSDETPGFRRRKAGRGFYYVTPEGDKLGAGDHIDRIRSLAIP
PAYQDVWITVEPLGHLQATGRDQRGRKQYRYHPKWHESRDATKYGELASFAQLLPTIREQ
VDADLRRRSLSYEKVTASVVWMLDNLLIRVGNEIYAKQNKSFGLTTLKKRHLDISGSVMR
FRFKGKSGKEWNLTHTDRRIAKIIRTIHELPGHQLFQYETGDGGRSTVKSDDINAYLREI
TGSELSSKLFRTWSGTRLAAIALSELEAPTSKTDAFRKINAAVDAVSSRLGNTRAVCRRC
YIHPAVIDTFEEGSLRDELKAIRPSRGAASEWMDDTELRLMRWLEKQNS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcgtatttcagccgaagagcatgccaaggcagcgcgtctcatctatgtgagc
gacgaaacacccggcttccgccgccgcaaggccgggcgtggcttctattatgtgacgccg
gagggcgacaagctcggcgccggcgatcacatcgatcgcatccggtcgctcgctattccg
ccggcttaccaggatgtctggatcacggtcgaaccgcttggccatctccaggcaacgggg
cgcgaccagcgcgggcgcaagcagtatcgatatcacccgaaatggcatgaatcccgcgac
gcgacgaagtacggcgaactcgcctccttcgcccagctgctgcccacgatccgcgagcag
gtggatgccgatctgcgccgccgatcactgtcttacgagaaggtcacggcatcggtggtc
tggatgctggacaatcttctgatccgtgtcggcaacgagatttacgcaaagcagaacaag
agcttcggcctgacgacgctgaagaagcgtcatctcgatatttctggctctgtcatgcgg
ttccgcttcaagggcaagtccggtaaagaatggaacctgacccataccgaccggcggatc
gccaagatcatccgaaccatccacgaactgcccggccatcagctctttcagtatgagacg
ggcgatggtggacgctctacggtcaagtcggatgacatcaacgcctatctgcgggagatc
accggctcggagctaagctcgaagcttttccggacgtggtccggcacgcggctggccgcc
attgcattgtcggagctggaagcccccacctccaagacggatgccttccgcaagatcaac
gcagctgtcgacgcagtctcgtcgcgtcttggcaacacccgcgcggtctgccgccgttgt
tatattcatcccgcagtgatcgacacattcgaggagggctcgctgagggatgagctgaaa
gccatccgcccatcgcgcggggcagcatcggagtggatggacgacaccgagcttcggctg
atgcgctggctggaaaaacaaaacagctga
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