Georhizobium profundi: D5400_11080
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Entry
D5400_11080 CDS
T05798
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
abaw
Georhizobium profundi
Pathway
abaw00240
Pyrimidine metabolism
abaw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
D5400_11080
Enzymes [BR:
abaw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
D5400_11080
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AZN71745
UniProt:
A0A3Q8XR41
LinkDB
All DBs
Position
complement(2326787..2327710)
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AA seq
307 aa
AA seq
DB search
MSPKNDASLVTYAPDVAEARASGKPIVALESTIITHGMPYPGNLEMARAVEAIVREEGAT
PATIAVIDGVLNVGLSDETLAALALRKDAMKLSRADLAFALAEGRTGATTVAATMIAAAH
AGIGVFATGGIGGVHRGAETSFDISADLDELARTGVIVVSAGAKAILDVPKTLEVLETRG
VPVVTFGSDVFPAFWSRESGLKSPLRLDTPDAIARFQKVRSAMGITGGMLIANPLPVEDE
IARDVMEAHIREAMGRAEKAGVSAKAVTPFLLSELVDITSGKSLRTNIALVKANVRLATR
IAVALAA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgaagaacgacgccagccttgtcacctatgccccggatgtcgccgaggcgcgg
gcgtccggcaagcccatcgtggcgctggaatcgaccatcatcacccacggcatgccctat
cccggcaatctcgaaatggcccgtgccgtcgaagccatcgtgcgtgaggaaggcgcgacg
ccggcgacgatcgcagtcatcgatggcgtcctcaatgtcggcctatcggatgagaccctg
gccgcgctcgcgctccgcaaggatgccatgaagctctcgcgcgccgatctcgccttcgcg
ctggctgaaggccgcaccggcgccaccacggtcgctgccaccatgatcgccgcggcccat
gccggcatcggcgtcttcgccaccggcggcatcggcggcgtgcatcgcggtgccgaaacc
agcttcgacatctccgccgatctcgacgagcttgcgcgcaccggtgtcatcgttgtctcc
gctggtgccaaggccatcctggatgtgccgaagacgctcgaagtgctcgaaacccgtggc
gtgcccgtcgtcaccttcggctcggacgtgtttcccgccttctggtcgcgcgaatccggc
ctgaagtcgccgctgcgcctcgacacgccggacgccattgcgcgctttcagaaggtccgc
tctgccatggggattaccggcggcatgctgatcgccaatcccttgccggtcgaagacgag
atcgcccgcgatgtcatggaagcgcatatccgcgaagccatgggccgcgccgaaaaagcc
ggcgtcagcgccaaggccgtaacgccgttcctgctctccgaacttgtcgacatcaccagc
ggcaagagccttcgaaccaacattgcgctggtcaaggccaatgtccgtctcgccacacgc
atcgcggtcgccctcgctgcctga
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