Georhizobium profundi: D5400_11850
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Entry
D5400_11850 CDS
T05798
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
abaw
Georhizobium profundi
Pathway
abaw00450
Selenocompound metabolism
abaw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
D5400_11850
Enzymes [BR:
abaw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
D5400_11850
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
D5400_11850
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
AZN71878
UniProt:
A0A3Q8XPD5
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All DBs
Position
2478034..2479275
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AA seq
413 aa
AA seq
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MDARTARNGYDVEAIRRDFPILSREVYGKPLVYLDNGASAQKPQAVIDAITHAYSNEYAN
VHRGLHFLSNAATDAYEASRSKVKRFLNAASEDEIVFTKSTTEAINTVAYGYGMPHIGEG
DEIVLTIMEHHSNIVPWHFIRERQGAKLVWVPVGDDGSFDLDAFAASLTERTKLVAITHM
SNVLGTVIPVKEVCRIAHERGIPVLVDGSQAAVHMPVDVRDIDCDFYVFTGHKVYGPSGI
GVLYGKTEMLKKMRPFQGGGEMIVDVSEEGVTYNEPPHRFEAGTPPIVQAIGLGAALDYM
DSIGREAIAAHEADLTAYAREKLQSVNALRVIGDAPGKGAIFSFEIEGIHAHDVSMVIDR
SGVAVRAGTHCAQPLLKRFGVTSTCRASFGMYNTRKEVDVLVEALEKARAFFA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccgcaccgcacgcaatggctatgacgtcgaagcgatccgccgcgacttcccg
atcctttcccgggaagtctacggcaagccgctggtctatctcgacaatggcgcatcggcg
cagaagccgcaggcggtgatcgatgcgatcacgcacgcttactcgaacgagtatgcgaac
gtgcatcgcgggctgcatttcctgtcgaatgcggcgaccgatgcctatgaggcatcgcgc
agcaaggtgaagcgcttcctcaatgctgcatccgaagacgagatcgtctttacgaagtcg
acgacggaggcgatcaacaccgtcgcctacggttacggcatgccgcatatcggcgagggt
gacgagatcgtgctgacgatcatggagcatcactccaatatcgtgccgtggcatttcatc
cgcgagcggcagggcgcaaagctcgtctgggtgccggtcggtgacgacgggtccttcgat
ctcgatgcgtttgctgcgagcctcacggagcgcacgaagctggtggcgatcacccacatg
tcgaacgtgctcggcaccgtcatcccggtcaaggaggtttgccgcatcgcgcacgagcgt
ggcatccccgtgctcgtcgatggcagccaggcggccgttcacatgccggtggatgtccgc
gacatcgattgcgatttctacgtcttcacggggcacaaggtgtacggtccgtccggcatc
ggcgtgctctacggcaagaccgagatgctgaagaagatgcggcccttccagggcggcggc
gagatgatcgtcgacgtatcggaagagggtgtgacgtacaacgagccgccgcatcgcttc
gaggccgggacgccgccgatcgttcaggcgatcgggctcggcgctgcgctcgactacatg
gacagcatcggccgcgaagcgattgccgcccacgaagcggatctgacggcctatgcgcgc
gagaagcttcagtcagtcaacgcgctgcgcgtgatcggcgatgcgccgggcaagggcgca
atcttctccttcgagatcgagggcatccacgcccatgacgtgtcgatggtgatcgatcgc
tcgggcgtggcggttcgagcgggtacccactgcgcgcagccgctcttgaagcgtttcggc
gtgacctccacatgcagggcatccttcgggatgtacaacacgcgcaaggaagtggatgtc
cttgtggaagcgcttgaaaaagcgcgtgccttcttcgcctga
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