Georhizobium profundi: D5400_12140
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Entry
D5400_12140 CDS
T05798
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
abaw
Georhizobium profundi
Pathway
abaw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D5400_12140 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abaw03021
]
D5400_12140 (rpoB)
03400 DNA repair and recombination proteins [BR:
abaw03400
]
D5400_12140 (rpoB)
Enzymes [BR:
abaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D5400_12140 (rpoB)
Transcription machinery [BR:
abaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D5400_12140 (rpoB)
DNA repair and recombination proteins [BR:
abaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D5400_12140 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
hSac2
Motif
Other DBs
NCBI-ProteinID:
AZN71924
UniProt:
A0A3Q8XQV1
LinkDB
All DBs
Position
2532126..2536268
Genome browser
AA seq
1380 aa
AA seq
DB search
MAQTISFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPEGGRPEEGLQAVFK
SVFPIQDFAGTSMLEFVSYEFEAPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQSVYMGDMPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVHARIDRRRKIPATSLLMALGMDAEEILETFYTKSHYAR
DGEGWRIPFQPNALKGTKAITDLIDADTGEVVAEAGRKLTPRVLKQMQEKGVKAIKATDD
DLYGAYLAEDMVNPTTGEVFLEAGDEIDEKTLPVLLEAGFDSIPVLDIDHINVGAYIRNT
LSADKNENRQDSLFDIYRVMRPGEPPTMETAEAMFNSLFFDSERYDLSAVGRVKMNMRLD
LDAADTVRTLRKDDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLASFARVNKYGFIESP
YRKIVDGKVTRDVVYLSAMEESKHYVAQANAELSEDGQFVDEFVICRHSGEVMMAPRETI
DLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRADAPFVGTGMESVVAR
DSGAAIAARRSGVVDQVDATRIVIRATEETDAAKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDRIEAGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVSEDVFTSI
HIDEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYVGAEVHPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGAHGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLTDMLSGHVAVAGPKTFKKGTKLDAAVMGDYPRSQWW
LFAVEDEKVQGGIEQLRAQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKS
KMQPGDKMAGRHGNKGVVSRIMPIEDMPFLEDGTHVDIVLNPLGVPSRMNVGQILETHLG
WACASLGKKIGNMLDAYKQSGDISELRATVDDVIGGGVKGEPIKDFDDESIVRVAEQTRR
GVSIATPVFDGAHEADVNVMLEKAGLNVSGQSTLYDGRTGEQFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTKIDDNADMEQLPDAAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccatttcattcaacggtcgtaggcgcgtacgcaagttcttcggtaagatt
ccagaagtcgcagagatgccgaacctcatcgaggttcagaaggcatcctacgaccagttc
ctcatggtcgacgagccggaaggcggtcgcccggaagaaggccttcaggccgtcttcaag
tcggtgttcccgatccaggatttcgccggcacctcgatgctcgagttcgtctcctacgaa
ttcgaagcgccgaagttcgacgtcgaagagtgccgtcagcgcgatctgacctacgcagcg
ccgctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggatacgggcgcgaag
tcgatcaaggacatcaaggaacagtccgtctacatgggcgacatgccgctgatgaccatg
aacggcacgttcatcgtcaacggtacagagcgcgtgatcgtttcgcagatgcaccgttcg
ccgggcgtcttcttcgaccacgacaagggcaagtcgcactcgtcgggcaagctgctcttc
gcagcccgcgtcatcccgtatcgtggctcctggctcgacatcgagttcgacgccaaggac
atcgtgcatgcgcgcatcgaccgccgccgcaagattccggcgacgtcgctcctgatggcg
ctcggcatggacgccgaggaaatcctcgagacgttctacacgaagtcgcactacgcccgt
gacggcgaaggctggcgcattccgttccagccgaacgcgctcaagggcaccaaggcgatc
acggacctgatcgatgccgatacgggcgaagtcgttgccgaagccggccgcaagctgacc
ccgcgtgtgcttaagcagatgcaggaaaagggcgtcaaggcgatcaaggcgaccgacgac
gacctttatggcgcctatcttgccgaggacatggtcaacccgacgaccggtgaagtcttc
ctcgaagcaggcgacgaaatcgacgagaagacgctgccggttctcctggaagcgggcttc
gactccatcccggttctcgacatcgaccacatcaatgtcggcgcctatatccgcaacacg
ctttcggcagacaagaacgagaatcgtcaggattcgctgttcgatatctaccgcgtgatg
cgtccgggcgagccgcccacaatggaaacggctgaagccatgttcaactcgctgttcttt
gatagcgagcgctacgatctgtcggccgttggccgcgtcaagatgaacatgcgcctcgac
ctcgatgctgccgacaccgttcgcacgctgcgcaaggacgatatccttgctgtcgtgaag
actctcgtcgagctgcgtgatggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgtgtgcgttcggtcggcgagctcatggagaaccagtatcgcctgggccttctgcgc
atggagcgtgcgatcaaggaacgcatgtcgtcgatcgagatcgacacggtcatgccgcag
gacctgatcaacgccaagccggccgctgctgctgttcgcgagttcttcggatcctcgcag
ctgtcgcagttcatggaccaggtgaacccgctgtcggaaatcacgcacaagcgccgtctt
tcggcacttggaccgggtggtctgacgcgtgagcgcgcaggcttcgaagtccgcgacgtt
catccgacgcactatggccgtatctgcccgatcgaaacgccggaaggcccgaacatcggt
ctgatcaactcgctcgcctcgttcgcccgcgtcaacaagtacggcttcatcgaaagcccg
taccgcaagatcgtggacggcaaggtgacgcgcgacgtcgtttatctttcggccatggaa
gagtccaagcactacgtggcccaggcgaacgccgagctcagcgaagacggtcagttcgtc
gacgaattcgtcatttgccgccactccggcgaagtgatgatggcgccgcgcgaaaccatc
gacctcatggacgtttcgccgaagcagcttgtttcggtagcggcggcgctcatcccgttc
ctcgagaacgacgacgccaaccgcgcgctcatgggttcaaacatgcagcgtcaggccgtg
ccgctgctcagggccgatgccccgttcgtcggaaccggcatggaatcggtcgtcgcccgc
gactccggcgctgccatcgcggcgcgtcgttcgggtgtcgtcgaccaggtcgatgcaacg
cgtatcgttattcgcgccacggaagagaccgatgccgcgaaatccggcgtcgacatctac
cgcctgcagaagttccagcgttcgaaccagaacacctgcgtcaaccagcgtccgctggtg
accgttggcgaccggatcgaagccggcgacatcatcgctgacggtccgtcgacagatctc
ggcgatctggcgctcggccggaacgtgctcgtcgcgttcatgccctggaacggctacaac
tacgaggactccatcctgctttccgagcgcatcgtctcggaagacgtgttcacctccatc
cacatcgacgagttcgaagtgatggcgcgcgacacgaagctaggaccggaagaaatcacg
cgtgacattccgaacgtttcggaagaggcgctgaagaacctcgacgaagccggcatcgtc
tatgtgggcgccgaagtgcatcctggcgacatcctcgtcggcaagatcacgccgaagggc
gagagcccgatgacgccggaagagaagcttctgcgcgccatcttcggtgaaaaggcatcc
gacgtccgcgacacgtccatgcgcatgcctccgggcgcccacggcaccgtcgtcgaagtc
cgcgtgttcaaccgccacggcgtcgagaaagacgaacgtgcgatggcgatcgagcgcgag
gaaatcgagcgtctggccaaggaccgcgacgacgagcaggcgatcctcgaccgtaacgtc
tacggtcgtctgaccgacatgttgtcgggccacgttgctgttgccggtccgaagaccttc
aagaagggcacaaagctcgacgcggccgtcatgggcgactatccgcgttcgcagtggtgg
ctgttcgccgtcgaggatgagaaggtccaaggtggcatcgagcagttgcgcgcccagtat
gacgagtccaagtcgcgccttgagcagcgcttcatggataaggtcgagaaggtccagcgc
ggcgacgagatgcccccaggcgtcatgaagatggtcaaggtcttcgtggcggtgaagagc
aagatgcagccgggcgacaagatggccggccgtcacggcaacaagggtgtcgtgtcgcgc
atcatgccgatcgaagacatgccgttcctcgaagacggtacgcatgtcgacatcgtgctg
aacccgctcggcgtgccttcgcgcatgaacgtcggtcagatcctcgaaacgcatctcggc
tgggcatgcgcttcgctcggcaagaagatcggaaacatgctggatgcctacaagcagtcc
ggcgacatctccgagcttcgcgccactgtcgacgacgtcatcggtggcggcgtcaagggt
gagccgatcaaggacttcgacgacgagtcgatcgttcgcgtggccgagcagacgcgtcgt
ggcgtgtcgatcgccacgccggtgttcgacggtgcgcacgaagccgacgtcaatgtcatg
ctggaaaaggcagggctcaacgtgtcgggtcagtcgacgctgtatgatggccgtaccggc
gagcagttcgaccgtcaggtcacggtcggctacatctacatgctgaagctgaaccacctg
gtggacgacaagatccatgcccgttcgatcggcccgtactcgctcgttacccagcagccg
ctgggcggcaaggcgcagttcggcggtcagcgcttcggcgagatggaggtctgggcactc
gaagcctatggtgccgcctacacgctgcaggaaatgctgaccgtgaagtcggacgacgtg
gctggccgtaccaaggtctacgaagcgatcgtgcgtggtgatgataccttcgaggccggc
attccggagagcttcaacgttctcgtgaaggaaatgcgctcgctgggtctcaacgtcgaa
ctcgagaacaccaagatcgacgacaacgccgacatggagcagctgcctgacgcagcggag
taa
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integrated database retrieval system
