Georhizobium profundi: D5400_12145
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Entry
D5400_12145 CDS
T05798
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abaw
Georhizobium profundi
Pathway
abaw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D5400_12145 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abaw03021
]
D5400_12145 (rpoC)
03400 DNA repair and recombination proteins [BR:
abaw03400
]
D5400_12145 (rpoC)
Enzymes [BR:
abaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D5400_12145 (rpoC)
Transcription machinery [BR:
abaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D5400_12145 (rpoC)
DNA repair and recombination proteins [BR:
abaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D5400_12145 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Phage_cement_4
ZER1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
AZN73776
UniProt:
A0A3S9B9W8
LinkDB
All DBs
Position
2536477..2540697
Genome browser
AA seq
1406 aa
AA seq
DB search
MNHEVMNLFNPQAPAQVFDSIRISIASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTSLQEHQLLSEEEYMIAVDEFGEDSFTA
MIGAEAIYELLAGMELEKIAGDLREDLATTTSDLKSKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIQNQNEPGEGMVFADMGELHHALE
NKVVTLHTKIKGRFKTVDENGKPVSQIHETTPGRMIIGELLPKNVNVPFDTCNQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMQLGFGHACRAGISFGKDDMVIPDTKAKIVGDTETL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEDMMARIKAVEFDAETGRQKPMNAIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTQTDCGTDKGLTMTAIVDAGQVVASLGQRVLGRT
SLDDINHPVSGELIVKAGTLIDENDVIAIEAASIQSVRIRSALTCEVQTGICGVCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGKVQIKNRN
VLRNSENELVAMGRNMAIQILDPKGNERSSQRVAYGSKLHVDDGDMVRRGQRLAEWDPYT
RPMMTEVAGTVEFEDLVDGLSVTESTDEATGITKRLVIDWRSTPRGSDLKPAIVIKDKNG
EIAKLSRGGEARFLLSVDAILSVEPGRKVSQGDVLARIPMESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTIRFGRDYKNKRRIQIEPAEDGVEPVEYLIPKGKPFHLQEGDFIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVE
ISEQGDSSYIAGDIVDVIELNQVNARLEEEGKKPASGEAVLLGITKASLQTPSFISAASF
QETTKVLTEAAVAGKTDTLQGLKENVIVGRLIPAGTGGQMSQIRRIATSRDDLILDARRK
SSGAETADPMLADMTARERAASTAAE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgaggtcatgaatcttttcaatccccaggccccggcgcaggtattcgatagc
attcgaatttccatcgccagcccggagaagattctctcctggtcgttcggcgagatcaag
aagccggaaaccatcaactaccgtacgttcaagccggagcgcgacggtctcttctgcgcg
cgcatctttggtccgatcaaggactatgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgtgaaaagtgcggcgtggaagtcacgctctcgcgcgttcgtcgc
gagcgcatgggccacatcgagctcgcagcgcccgtcgcccacatctggttcctgaagtcg
ctgccgagccgtatcggcacgctgctcgacatgacgctcaaggatatcgagcgcgtcctg
tacttcgaaaactacatcgtgaccgagcccggcctcacctcgcttcaggagcaccagctg
ctgtctgaagaagagtacatgattgccgtcgacgaattcggcgaggattccttcaccgcc
atgatcggcgccgaggccatctatgagcttctggccggcatggagttggagaagatcgcg
ggcgatctgcgcgaagatctcgcaacgacgacttcggacctgaagtcgaagaagctgatg
aagcgcctcaagatcgtcgagaacttcatggaatccggcaatcgtccggagtggatgatc
atgaaggtggttccggtgatcccgccggacctgcgtccgctggttcctctggacggcggt
cgcttcgcgacgtccgacctgaacgacctctaccgccgcgtgattaaccgcaacaaccgt
ctgaagcgtctgatcgaactgcgcgcgccgggcatcatcatccgcaacgagaagcgcatg
cttcaggagtcggtcgatgcactgttcgacaacggccgtcgcggccgcgtcatcacgggt
gccaacaagcgtccgctgaagtcgctttccgacatgctcaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtgaccggt
ccggaactgaagctgcaccagtgtggcctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctacgcccgtctcgacgccaagggttactcctcgaccgtcaagcaggcgaag
aagctcgtcgaaaaggaaaagccggaagtctgggatatcctggacgaggtcatccgcgag
catccggttctgctgaaccgtgcgccgacactccaccgtctgggcattcaggcgttcgaa
cccacgctcgtcgagggcaaggcgatccagctgcatccgctcgtctgcacggcgttcaac
gccgacttcgacggtgaccagatggccgtgcacgttccgctgtcgctcgaagcgcagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcaccctgcatccggcgcaccg
atcatcgtgccgtcgcaggacatggttctcggcctctactatctgtcgatccaaaaccag
aacgagccgggcgaaggcatggtcttcgccgacatgggcgagctgcatcacgcgcttgag
aacaaggtcgtgacgctgcacaccaagatcaaaggccgcttcaagacggtcgacgagaac
ggcaagccggtctcgcagatccacgagactacccctggccgcatgatcatcggcgaattg
ctgccgaagaacgtcaacgtgccgttcgacacctgcaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccactgcggtcagaaagagacggtcatcttc
tgcgaccgcatcatgcagctgggcttcggccacgcctgccgtgcgggcatttcgttcggc
aaggacgacatggtcatcccggacacgaaggcgaagatcgtcggcgacactgaaacgctc
gtgaaggaatacgagcagcagtacaatgacggcctgattacgcagggtgagaagtacaac
aaggtcgtcgacgcctggggcaaggccaccgaaaaggtcgccgaggacatgatggcccgc
attaaggccgtcgagttcgacgcggagaccggtcgtcagaagccgatgaacgccatctac
atgatgagccactccggtgcgcgtggttcgccgaaccagatgcgtcagctgggcggcatg
cgcggcctcatggccaagccttcgggcgagatcatcgaaacaccgatcatctcgaacttc
aaagaaggcctgaccgtgaacgagtacttcaactcgacgcacggcgcccgtaagggtctg
gcggatacggctctgaagacggcgaactcgggttacctgacccgtcgtctcgtcgatgtc
gcacaggactgcatcgttacccagacggactgcggtaccgacaagggcctgacgatgacg
gcgatcgtcgatgccggccaggtggtcgcatcgctcggtcagcgcgttctcggtcgcacc
tcgctcgacgacatcaaccacccggtttcgggcgagctgatcgtcaaggccgggacgttg
atcgacgagaacgacgtcatcgccatcgaagcggccagcatccagtcggtccgcattcgt
tcggctctgacctgcgaagttcagaccggcatctgcggcgtctgctacggacgtgacctg
gcgcgcggtacccccgtcaaccagggcgaggccgtcggcgtcatcgcggcgcagtcgatc
ggcgagccgggcacgcagctcaccatgcgtacgttccaccttggtggtacggcaaccgtg
gtggaccagtcgttcctggaagcgtcttacgaaggcaaggtgcagatcaagaaccgcaac
gtgctccgcaattcggagaacgaactcgtcgccatgggccgcaacatggccatccagatc
ctggatccgaagggcaacgagcgttcctcgcagcgcgtggcatacggctcgaagctccat
gtcgacgatggtgacatggttcgtcgtggccagcgtctggccgagtgggatccctatacc
cgcccgatgatgacggaagttgcgggtacggtggagttcgaagatctggtcgacggtctc
tccgtcacggaatcgactgacgaagcaaccgggatcaccaagcgtctggtcatcgactgg
cgttcgaccccgcgcggttcggatctcaagccggcgatcgtcatcaaggacaagaacggg
gagatcgccaagctgtcgcgtggcggcgaagcccgcttcctgctctcggtggacgcgatc
ctttcggtcgaacccggccgcaaggtcagccagggtgacgtgcttgcgcgtatcccgatg
gaaagcgcgaagacgaaggacatcaccggcggtctgccgcgtgttgccgaactcttcgaa
gcccgccgtccgaaggatcacgccatcatcgccgaaattgacggcacgatccggtttgga
cgcgactacaagaacaagcgtcgcatccagatcgagccggcggaagacggtgtcgagccg
gtcgagtacctgatcccgaagggcaagccgttccacctgcaggaaggcgatttcatcgag
aagggcgattacattctcgacggcaatcccgctccgcacgacatccttgccatcaagggc
gtcgaggcactggcttcctatctcgtcaacgagatccaggaagtctaccgactgcagggc
gttctgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgag
atcagcgagcagggcgactccagctatatcgctggcgacatcgtcgacgtgatcgagctc
aaccaggtcaatgcgcgcctggaagaagagggcaagaagccggccagcggcgaagctgtt
ctgctcggcatcaccaaggcctcgctccagacgccgtccttcatctccgccgcctccttc
caggagacgacgaaggtgctgaccgaagcagctgttgccggcaagaccgacacgctgcag
ggtctgaaggagaacgtgatcgtcggtcgtctcatccctgccggtaccggcggccagatg
agccagatccgtcgcatcgcgacgtcgcgcgacgacctgatcctcgatgcccgccgcaag
tcgtcgggtgccgagacggccgacccgatgctggcggacatgacggcacgcgagcgtgcg
gcttcgaccgccgcggaataa
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integrated database retrieval system
