Georhizobium profundi: D5400_12410
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Entry
D5400_12410 CDS
T05798
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
abaw
Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
abaw01002
]
D5400_12410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abaw01011
]
D5400_12410
Peptidases and inhibitors [BR:
abaw01002
]
Cysteine peptidases
Family C82
D5400_12410
Peptidoglycan biosynthesis and degradation proteins [BR:
abaw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
D5400_12410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AZN71971
UniProt:
A0A3Q8XPJ5
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All DBs
Position
2585315..2587375
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AA seq
686 aa
AA seq
DB search
MPSRFGSANGHRKHGAGMLSKRTGTVAAMAWLLAAGTIAVPQGPASAQTLLDFIMGGPGA
VQRNAERRGSPLDSGQVTQQPSSVDQLRAWEASQRQAEPEPVVVGPKYYTYKADELVRVD
FSKLADPVVTGSISEGGDQPPINAFAQASRHLSDIQVRALAEVGEAVTAFYGENAGFVWT
DDNGPNARAEAALAVFAKADRVGLSPADYLVEWPAPAASSAMTNQATAARTVALASDASQ
SNATQAAVPNPDRARLQFEMEMAAAVASYMLDATRGRIAPNRISGYHDFDRKEVDLVAGL
KVAARTANIASYLERRSPTHAKFQALQAEYDRLIAEDADVDRVEIAEGTLVRPGSSNPEL
TKIIAAIRERGSDALKTTHSLTFADYQGSPVYDTALVELVKDFQKESGLMDDGIIGRNTI
VKLTGVSNARKIEAVQLSMERLRWINRDLGERHVMINAPAFKVSYVEDGKEALEMRAVVG
TKANQTYFFQDEIQTVELNPYWGVPRSIIVNEMLPKLRQDPGYLDRIGYEVTTQGGTQVA
SSSINWYGVGANVPYNVRQPPGSSNALGELKIMFPNEHAIYMHDTPAKDLFGRDTRAYSH
GCVRLEDPRAMAAAVLGTDKADIGSQIADGRNKVLKVEANIPVYIAYFTAWPNAEGKVEY
FDDVYERDMYLGRAITATNQARNADS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccggttcgggtcggcaaacggacatcgaaaacacggagctggtatgctttcc
aaaaggacaggcacggtcgcggcgatggcgtggcttctcgcagccggaacgatcgcggtg
cctcagggccctgcgtccgctcagacattgctcgacttcatcatgggcggtccaggcgcc
gtccagcgcaatgccgaacgtcgcggttcgccgctcgacagcgggcaggttacgcagcag
ccgtccagcgtcgaccagttgcgtgcctgggaagcctcgcagcgccaggccgagcccgag
cccgtcgtggtcgggcccaaatactatacctataaggcggacgaactcgtccgcgtcgat
ttttcgaagcttgccgatccggtcgtgaccggctcgatctccgaaggcggtgatcagccg
cccatcaatgccttcgctcaggcaagccggcacctgtccgacatccaggtgcgcgcgctg
gccgaagtcggtgaagccgtgacggcgttttacggcgagaatgctggcttcgtctggacc
gatgacaatggtccgaacgcccgagccgaggcggctctggccgtgtttgcgaaggccgac
cgggtcgggctctcaccggccgactatctggtcgagtggcctgcgcccgcagcgagctct
gccatgacgaatcaggccactgcggctcggaccgtcgcattggcgtctgatgcatctcag
tccaatgcaactcaggcagctgtgccaaacccggatcgcgcccggctccagttcgagatg
gagatggcggccgccgtcgcgtcctacatgctcgatgccacccgtgggcggatcgcgccg
aaccggatttcgggctaccacgatttcgaccggaaggaggtcgacctcgtcgctgggctg
aaggtcgcagcgcgcacggccaatatcgcctcctaccttgagcgccgcagcccgacgcat
gcgaagttccaggctttgcaggccgaatatgaccggctgatcgccgaggatgcggacgtc
gatcgcgtcgagatcgccgaaggtacgctcgtgcgtcccggcagcagcaatccggagctg
acaaaaatcatcgccgccattcgcgagcggggatcggacgcgctgaagaccacgcattcg
ctgacctttgcggactaccagggcagccccgtctacgacaccgcactcgtggagctcgtc
aaggatttccagaaggaatccggcctgatggatgacggcatcattggtcgcaacacgatc
gtgaagctcaccggtgtcagcaatgcgcgcaagatcgaggcagtccagctctcgatggag
cggctgcggtggatcaaccgcgatctcggcgagcgccacgtcatgatcaacgcgccggcc
ttcaaggtcagctatgtggaagacggcaaggaagcgctggaaatgcgcgccgtggtcggc
accaaggccaaccagacctatttcttccaggacgagatccagaccgtcgagctcaacccc
tactggggcgtgccgcggtcgatcatcgtcaacgagatgctgccaaagctgcgccaggat
cccggctatctcgatcgcattggctacgaggtgacgacgcagggcggtacgcaggtcgcg
tcaagctcgatcaactggtacggcgtcggcgccaacgtgccctacaatgtccgccagccc
ccgggctcgtccaatgcgctcggcgagctgaagatcatgttcccgaacgagcatgcgatc
tacatgcacgacactccggccaaggacctgttcggccgtgatacccgcgcatacagccat
ggctgcgtgcggctggaggacccgcgtgcgatggcggcggccgtgcttggcaccgacaag
gccgatatcggcagccagattgccgatggccgcaacaaggtgctgaaggtggaagccaat
atcccggtctacatcgcctacttcacagcctggccgaacgccgagggcaaggttgagtat
ttcgacgatgtctatgagcgggacatgtatctcggtcgcgccatcaccgcgacgaaccag
gcgcgcaacgccgacagttaa
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