Georhizobium profundi: D5400_13025
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Entry
D5400_13025 CDS
T05798
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
abaw
Georhizobium profundi
Pathway
abaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5400_13025 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abaw03019
]
D5400_13025 (recQ)
03400 DNA repair and recombination proteins [BR:
abaw03400
]
D5400_13025 (recQ)
Enzymes [BR:
abaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5400_13025 (recQ)
Messenger RNA biogenesis [BR:
abaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5400_13025 (recQ)
DNA repair and recombination proteins [BR:
abaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5400_13025 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZN73796
UniProt:
A0A3Q8XRW6
LinkDB
All DBs
Position
complement(2697457..2699277)
Genome browser
AA seq
606 aa
AA seq
DB search
MCPPDQSRGSRVYDSPNSVLREVFGYRDFRPGQRDVIDRIMAGRNVLAVMPTGAGKSICF
QVPALMSPRLTIVISPLVALMDDQTAALRANGVAVAAIHSGHDRQVNVDAWRDVSSGRAK
LLYLSPERLMTDRMLDAIGRLDPGLFVIDEAHCISKWGANFRPEYERLSELKTRFPKARI
AAFTATADSATQGDIAEKLFGGNGEIALQGFDRPNLFLAVEPKRDWKSQLVAFLEERADQ
SGVVYCLSRQSTDDVAAYLVEKGFNAIAYHAGHPPEVRRERQGRFMRESAIMVATIAFGM
GIDKPDIRFVCHMNLPSSMEAYYQEIGRAGRDGLPADTQLFFGLDDVRMRRQFIENDGED
RDHILREHKRLDALLAYAETAGCRRVALLAYFDEEGQPCGNCDNCTDPPEVIDGTGEAMK
LFGVIAATGQSFGASHLIDVLRGGRTAKIEERQHHDLALFGSGATRSKAYWQAFVRQAVA
NRYLSINIQRYGALELTPLADQTLVGKARFELREIVEQAQSTRPAPRKTVTIDPDAEPLF
ARLKALRLEFARERSVPAYVVFPDATLIDMAQLRPRTMDELAMVNGVGPKKLGDYGEAFL
KVMREA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atttgcccgccggatcaatccagaggttccagagtgtacgacagcccgaactccgtgctg
cgtgaagtcttcggctatcgagatttcaggcccggccagcgcgacgtcatcgaccggatc
atggccggtcgcaacgtgctggccgtgatgccgacgggggcgggcaagtcgatctgcttt
caggtgccggcactgatgagcccacgtctgacgatcgtgatctcgccactggtcgccctg
atggacgatcagaccgcggcgctgcgcgcgaacggcgttgccgttgcggcgatccactcc
ggccatgaccgccaggtgaatgtcgatgcctggcgcgacgtttcctcaggccgtgcgaag
cttctctatctgtcgccggaacggctgatgaccgaccggatgctggacgcgatcggacgg
ctcgacccgggactgttcgtcatcgatgaagcgcactgcatctccaaatggggagcgaac
ttccgcccggaatacgagcgtctctcggagctgaagacacgctttccgaaggctcggatc
gcggcgttcacggcgacggcggacagtgccacgcagggagacatcgccgagaagctgttc
ggtggaaacggcgagatcgcactccaggggttcgatcggcccaaccttttccttgcggtt
gaacccaagcgcgactggaagagccagctcgtcgcgtttctcgaagagcgggccgaccag
tccggtgttgtctattgcctctcccggcagtcgaccgacgatgtcgcggcctatctggtg
gagaaaggtttcaacgcgattgcctaccacgccggccatccgccggaggtgcgccgggag
cgacaagggcgcttcatgcgcgaatccgccatcatggtggcgaccatcgctttcggcatg
ggcatcgacaagccggatatccgcttcgtctgccacatgaaccttccaagcagcatggag
gcatactaccaggagatcggccgcgcaggccgtgacggtctgcccgcagatacgcagctc
ttcttcggcctggacgatgtgcgcatgcggcgtcagttcatcgagaatgatggcgaggac
cgcgaccacattctgcgcgagcacaagcggctcgatgcgctgcttgcctatgccgaaacc
gccggctgccgtcgcgtcgcgctgctcgcctatttcgacgaggaaggccagccttgcggc
aactgcgacaactgcaccgatccgccggaggtgatcgacggcaccggcgaagccatgaag
cttttcggtgtcattgccgccacaggccagagtttcggcgcgtcacacctcatcgacgtg
ttgcgtggcgggcgcacggctaagatcgaggaacgccaacaccacgatttggcgctcttc
ggcagcggcgcaacgcgttccaaggcctactggcaggccttcgtgcgccaggccgtggcg
aaccgctatctgtccatcaatatccagcgttacggagccctggagctcacaccgctggct
gaccagaccctggttggcaaggctcgcttcgagcttcgcgagatcgtcgagcaggctcag
tcgacccgtcccgctcctcgcaagaccgtcacgatcgatccggacgccgaaccattgttt
gcgcgtctcaaggcactgcggctggaattcgcacgcgagcggtccgtacctgcctatgtg
gtcttcccggatgccacactgatcgacatggcccagcttcgcccgcgcaccatggatgaa
ctcgccatggtcaatggcgtcgggccgaaaaagctcggtgactatggggaagcattcctg
aaagtcatgcgcgaggcctga
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