Georhizobium profundi: D5400_14435
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Entry
D5400_14435 CDS
T05798
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abaw
Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abaw03032
]
D5400_14435 (topA)
03400 DNA repair and recombination proteins [BR:
abaw03400
]
D5400_14435 (topA)
Enzymes [BR:
abaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D5400_14435 (topA)
DNA replication proteins [BR:
abaw03032
]
Prokaryotic type
DNA Topoisomerases
D5400_14435 (topA)
DNA repair and recombination proteins [BR:
abaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D5400_14435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZN72316
UniProt:
A0A3Q8XRS0
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All DBs
Position
2975123..2977798
Genome browser
AA seq
891 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGKDFKVLASFGHVRDLPAKDGSVKPDEDFEMSWEVDTASNK
RLKDITDALKGADSLILATDPDREGEAISWHVLEVLNKKKALKGKSVQRVVFNAITKKAV
LDAMANPRDIDAPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
EAEIERFVAEEYWQISADLKTPRNDVFNARLSSYEGKRIQRQTVSNVGEADTIKAMLEGA
SFTVESVEAKPTKRNPAPPFTTSTLQQAASSKLGFNAKRTMQVAQKLYEGIDIGGETVGL
ITYMRTDGVQMDMSAIEAAREEIASNFGDRYRPEKPRFYSTKAKNAQEAHEAIRPTGFER
RPDDVKRYLDQDQIRLYDLIWKRAIASQMASAEIERTTVEIAAKNGDKIAGLRATGSVIR
FDGFIAAYTDQKEDGEQSDDGDDDGRLPEINARETVAKEKINASQHFTEPPPRYSEATLI
KRMEELGIGRPSTYAATLSTLQDREYVEIDKRKLIPQAKGRLVTAFLQNFFERYVEYDFT
ANLEEQLDKISNGDLAWKDVLRAFWKDFFAQIENTKELRVSDVLDVLNEELAPIVFPKRE
DGGNPRICPTCGTGNLSLKLGKFGAFVGCSNYPECNFTRQLSAESANGDEAQLSGEPKDL
GRDPHTGEPITLRSGRFGPYVQRGDGKEAKRSSLPKGWKVEDIDHEKAMALIGLPRDIGK
HPESGKMISAGLGRYGPFLLHDGGYANLETVEDVFTIGLNRAVTVIAERKAKGPARGRTA
TAALKELGEHPDGGAITVRDGRYGPYVNWGKVNATLPKDLDPQAVTLEKALELVAERAGK
SGKKAAPKKAAAKKATPAKKPAAAKKAAPKKKAAAAKTSTEKTSSAKSKEA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcgtcgtcgaatcgcctgccaaggcaaagacaatcaacaaatacctcggc
aaggacttcaaggtcctggcctcgttcggccatgtgcgcgacttgccggccaaggacggc
tcggtgaagccggacgaggatttcgagatgagctgggaggtggataccgcctccaacaag
cgactgaaagacatcaccgacgcgctgaagggcgccgacagcctcattctcgcgaccgac
ccggatcgcgaaggggaagccatttcctggcacgtgctcgaagtgctgaacaagaagaag
gcgctgaagggcaagtccgtccagcgcgtcgtcttcaacgcgatcaccaagaaggccgtg
ctcgatgcgatggccaatccgcgcgatatcgatgcgccgctggtcgatgcctatctggcg
cggcgcgcgctcgactatctcgttggcttcaatctgtctccggttctgtggcgcaaactg
cccggcgcgcgctcggccggccgcgttcagtcggtggcgcttcgtctcgtttgtgatcgc
gaagccgaaatcgagcgcttcgtcgccgaagaatactggcagatcagcgccgacctgaag
acaccgcgcaacgacgtcttcaatgcgcggctctcgtcctatgagggcaagcggattcag
cgccaaaccgtgtcgaatgtcggcgaagccgacacgatcaaggcgatgctcgaaggcgcc
tccttcacggtcgaaagcgtcgaggcaaagcccaccaagcgcaacccagccccgcccttc
acgacctcgaccctgcagcaggctgcatcgtccaagctcggcttcaacgccaagcgcacc
atgcaggtcgcgcagaagctctacgaaggcatcgacatcggcggcgagaccgtcggtctc
atcacctatatgcgaaccgatggcgtgcagatggacatgagcgccatcgaggctgcacgc
gaggagatcgcgtcgaatttcggcgaccgctaccggcccgaaaagccgcgcttctattcg
accaaggcgaagaacgcacaggaagcccacgaggcgatccgccccaccggcttcgagcgc
cgccccgatgacgtgaagcgctatctcgaccaggaccagatccgcctttacgacctgatc
tggaagcgggcgatcgccagccagatggcctcggcggagatcgagcggaccaccgtcgag
atcgccgccaagaatggcgacaagatcgcgggcctgagagccacgggctccgtcatccgc
ttcgacggcttcatcgccgcctacactgatcagaaggaagacggagagcaatcggacgac
ggtgacgacgatggccgtctgccggaaatcaatgcgcgcgaaacggtcgccaaagagaag
atcaacgcatcccagcatttcaccgagccgccgccgcgctactcggaagcgacgttgatc
aagcgcatggaagagctcggcatcggccggccctcgacctatgcggcgacgctttccacg
ctgcaggaccgtgaatatgtcgagatcgacaagcgcaagctgatcccgcaggccaaggga
cgtctcgtcacagcgtttctgcagaacttcttcgagcgttatgtggagtacgacttcaca
gccaatctcgaagagcagctcgacaagatctcgaacggcgatctcgcctggaaagacgtg
ctgcgcgcgttctggaaggacttcttcgcgcagatcgagaacaccaaggaattgcgcgtt
tccgatgtgctcgacgtattgaacgaagagcttgccccgatcgtcttccccaagcgcgaa
gacggcggcaatccacgcatctgcccgacctgcggcaccggcaatctgtcgctgaagctc
ggcaagttcggcgccttcgtcggctgctcgaactatccggaatgcaatttcacccgccag
ctttccgccgagagcgccaatggcgatgaagcgcaactgtccggcgagccgaaggatctg
ggccgcgacccacacacgggcgagccgatcacgcttcgatcgggccgcttcggaccttac
gtccagcggggcgacggcaaggaagcgaagcgctcgagcttgccgaagggctggaaggtc
gaagacatcgaccatgaaaaggcgatggcgctgatcggcctgccgcgcgacatcggcaag
caccccgaaagcggcaagatgatttcggccggcctcggccgctacggtccgttccttctg
cacgatggcggctacgccaatctcgagacggtcgaggatgtcttcaccatcggcctcaac
cgggcggtgacggtgattgcggaacgcaaggccaagggccctgcgcgcggtcgcacagcc
actgctgcgttgaaggagctcggcgagcaccccgatggcggcgcgatcaccgtgcgcgac
gggcgttacggcccctatgtcaactggggcaaggtcaacgcgacgcttccgaaggacctc
gacccgcaggccgtgacgcttgaaaaggcactggagctggtggccgagcgcgccggcaag
agcggcaagaaggctgcgccgaagaaggcggcagccaagaaggcaaccccggccaaaaag
ccggctgctgcaaagaaggccgccccgaagaagaaagcggcagccgccaagacatcgacc
gagaagacaagttcggcaaaatcgaaggaggcgtag
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