Georhizobium profundi: D5400_15085
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Entry
D5400_15085 CDS
T05798
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
abaw
Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abaw03016
]
D5400_15085 (rnd)
Enzymes [BR:
abaw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D5400_15085 (rnd)
Transfer RNA biogenesis [BR:
abaw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D5400_15085 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZN73850
UniProt:
A0A3Q8XUG0
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All DBs
Position
3108085..3109233
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AA seq
382 aa
AA seq
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MITSTDALAAACDRLSTSEFVTIDTEFLRETTFWPQLCLIQMASPDLAVIVDPLASGIDL
SPFFKLMADTKITKVFHAARQDIEIIFHLGDLIPHPIFDTQIAAMVCGFGDSISYDQLVA
RITGGRIDKTSRFTDWSRRPLSDTQLEYALADVTHLRDVYLHLKAELEREGRTHWLKEEM
DVLESRETYDLHPDDAWKRLRMRVKKPRELAILQTVAAWREREARARDVPRGRVLKDDAI
YEIAQQAPKDTEALSRLRTIQRGWERSQAGQAVITAVNEALAIPKDDMPRLERSRAAPEG
AGAATELLKVLLKLITEREGVAPKIIANADDLEQIATNGEDADVPALHGWRREMFGDKAL
DLINGRLALRFKEKRVDTLDIG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atcattacatcgaccgacgcccttgcggccgcctgcgacaggctctccacttccgagttc
gtgacgatcgacacggagtttcttcgcgaaacgacgttctggccgcagctttgcctcatc
cagatggcatcgccggacctcgccgtcattgtcgacccgttggcgagcggtatcgacctc
agcccgttcttcaaactgatggccgatacgaagatcaccaaggtctttcacgctgcacgt
caggatatcgagatcattttccacctgggcgatctcattccccacccgatcttcgatacg
cagatcgcggcgatggtgtgcgggttcggcgattcgatctcctacgaccagctggtggcg
cgcatcaccggtgggcgcatcgacaagacgtcgcgcttcaccgactggagccgcagaccg
ctatcggacacgcaactcgaatatgcgctggccgacgtcactcatctgcgggacgtctat
ctgcatctgaaagccgagttggagcgcgaaggccgcacacactggctcaaggaagagatg
gacgttctggaatcgcgcgagacctacgatctacatcccgacgacgcctggaagcggctg
cggatgcgggtgaagaagcctcgcgaactcgcaatcctacagaccgttgctgcatggcgc
gagcgcgaggcgcgtgcccgcgacgttccgcgcggccgggtgctcaaggacgacgccata
tacgagattgcgcagcaggcgccgaaggataccgaagccttgtcgcgactgcgcaccatc
cagcgcggctgggaacgctctcaggctggtcaggcggtgatcacggccgtcaacgaggca
ctggcgatcccaaaggatgacatgccccgcctggagcgttcgcgcgccgcgcccgagggt
gccggtgcggcaaccgaactcctgaaggtgctcctgaagctcatcacggaacgcgaaggc
gtcgcaccgaagatcatcgcgaatgccgacgatctggaacagatcgcgaccaatggcgag
gatgcagacgtgccggcactccatggctggcggcgcgagatgttcggcgacaaggctctg
gacctgatcaacggtcgcctggcgctgcgtttcaaagaaaagcgcgtggacacactcgac
atcggctaa
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