KEGG   Georhizobium profundi: D5400_20560
Entry
D5400_20560       CDS       T05798                                 
Name
(GenBank) hypothetical protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
abaw  Georhizobium profundi
Pathway
abaw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abaw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D5400_20560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abaw03019]
    D5400_20560
   03110 Chaperones and folding catalysts [BR:abaw03110]
    D5400_20560
   03029 Mitochondrial biogenesis [BR:abaw03029]
    D5400_20560
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:abaw04147]
    D5400_20560
Enzymes [BR:abaw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     D5400_20560
Messenger RNA biogenesis [BR:abaw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     D5400_20560
Chaperones and folding catalysts [BR:abaw03110]
 Heat shock proteins
  HSP60 / Chaperonin
   D5400_20560
Mitochondrial biogenesis [BR:abaw03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    D5400_20560
Exosome [BR:abaw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   D5400_20560
  Exosomal proteins of other body fluids (saliva and urine)
   D5400_20560
  Exosomal proteins of breast cancer cells
   D5400_20560
  Exosomal proteins of colorectal cancer cells
   D5400_20560
  Exosomal proteins of bladder cancer cells
   D5400_20560
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AZN73977
UniProt: A0A3S9BAN8
LinkDB
Position
4228489..4229649
AA seq 386 aa
MSRPIERDDELFNVAYVAVHGDEALALSATEMFMAARATSSGSSRLSPGLPNSGASASLS
VELMDIHHVALKNDPTEPCRLCEPLILLLSSSVSHEGILFPYIRHAQSLRRPLLVLTPNI
DPALRSSVERYRAAFSAEIAFACLAGNERQRSVWLREIAALTGGTPADREAVVANDIDAL
GGCHTAVLTRDTLRIVQAPSGALTAGPIQHRFVALGRRGEGTRHDVSSETEVDEGTPDRE
RKRRLSEAVSSVNAASQHGVLVGGGSSLLQAIDGLRDFGETTPEQKLGREIVSEALRAPA
TRLIDNASQNGRSTVDALLGDFQTNCGFDASSGIVTDLLKLGVLDATDVVRAALSSASSI
AGLMSLTETLVLQEAEHHSKVTYFRL
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgagccgtcccatagaaagggacgacgagttattcaacgtcgcatatgtggcagttcat
ggagacgaagctctggcgctcagcgccacggagatgttcatggccgcgcgtgccacatct
tcgggctcttcccgcttatcgccagggcttccgaacagtggcgcttcagcgtccttgtcg
gtcgagcttatggacattcatcatgtcgctctcaagaatgacccaactgaaccctgccga
ctgtgcgagccgctgatattgttattgtcctcgtccgtcagtcatgagggcattctcttc
ccttacattcgtcatgcacagtcgctgagacgtccgcttctggtgcttacacccaatatc
gacccagcgttgcgcagttctgtcgagagatacagagcggctttttccgcagaaattgct
tttgcatgtttagcaggaaacgaacggcagcgatcggtttggctcagggaaatagctgca
ttgactggcggaacgccggctgaccgagaagctgtcgtcgccaatgacattgacgcgttg
ggaggatgccacacggctgtattgacccgagatacgctccggatcgttcaagcaccgtcg
ggagcgttgacggcgggtcccatacaacaccgatttgtcgctctaggcaggcgaggagaa
ggcactcgtcacgacgtttcatcggaaacagaggtcgacgaagggacgcccgacagagag
cgcaaacgacgcttgagcgaggcggtttcttcggtgaacgcggctagccaacatggcgtg
ctggtcgggggcggcagcagtctattgcaagcaatcgatggcttgcgcgatttcggcgag
acgaccccagagcagaaactcggacgtgagatcgtgtcggaagcgctgcgcgcgccggca
acgcgactgattgataacgccagtcaaaatgggcggtccaccgttgatgccctgctcggc
gactttcagacgaattgcgggttcgatgctagctcgggcatcgtcaccgacttgctcaaa
ttgggggtcctcgacgcgacagacgtcgtgagggcggcactttcgagcgcttcttcaatc
gccggactgatgtctctcaccgaaacactggtcctgcaagaagccgagcaccattcaaaa
gtgacgtattttcgattgtga

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