Georhizobium profundi: D5400_20560
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Entry
D5400_20560 CDS
T05798
Name
(GenBank) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
abaw
Georhizobium profundi
Pathway
abaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5400_20560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abaw03019
]
D5400_20560
03110 Chaperones and folding catalysts [BR:
abaw03110
]
D5400_20560
03029 Mitochondrial biogenesis [BR:
abaw03029
]
D5400_20560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abaw04147
]
D5400_20560
Enzymes [BR:
abaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
D5400_20560
Messenger RNA biogenesis [BR:
abaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D5400_20560
Chaperones and folding catalysts [BR:
abaw03110
]
Heat shock proteins
HSP60 / Chaperonin
D5400_20560
Mitochondrial biogenesis [BR:
abaw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
D5400_20560
Exosome [BR:
abaw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D5400_20560
Exosomal proteins of other body fluids (saliva and urine)
D5400_20560
Exosomal proteins of breast cancer cells
D5400_20560
Exosomal proteins of colorectal cancer cells
D5400_20560
Exosomal proteins of bladder cancer cells
D5400_20560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AZN73977
UniProt:
A0A3S9BAN8
LinkDB
All DBs
Position
4228489..4229649
Genome browser
AA seq
386 aa
AA seq
DB search
MSRPIERDDELFNVAYVAVHGDEALALSATEMFMAARATSSGSSRLSPGLPNSGASASLS
VELMDIHHVALKNDPTEPCRLCEPLILLLSSSVSHEGILFPYIRHAQSLRRPLLVLTPNI
DPALRSSVERYRAAFSAEIAFACLAGNERQRSVWLREIAALTGGTPADREAVVANDIDAL
GGCHTAVLTRDTLRIVQAPSGALTAGPIQHRFVALGRRGEGTRHDVSSETEVDEGTPDRE
RKRRLSEAVSSVNAASQHGVLVGGGSSLLQAIDGLRDFGETTPEQKLGREIVSEALRAPA
TRLIDNASQNGRSTVDALLGDFQTNCGFDASSGIVTDLLKLGVLDATDVVRAALSSASSI
AGLMSLTETLVLQEAEHHSKVTYFRL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcccatagaaagggacgacgagttattcaacgtcgcatatgtggcagttcat
ggagacgaagctctggcgctcagcgccacggagatgttcatggccgcgcgtgccacatct
tcgggctcttcccgcttatcgccagggcttccgaacagtggcgcttcagcgtccttgtcg
gtcgagcttatggacattcatcatgtcgctctcaagaatgacccaactgaaccctgccga
ctgtgcgagccgctgatattgttattgtcctcgtccgtcagtcatgagggcattctcttc
ccttacattcgtcatgcacagtcgctgagacgtccgcttctggtgcttacacccaatatc
gacccagcgttgcgcagttctgtcgagagatacagagcggctttttccgcagaaattgct
tttgcatgtttagcaggaaacgaacggcagcgatcggtttggctcagggaaatagctgca
ttgactggcggaacgccggctgaccgagaagctgtcgtcgccaatgacattgacgcgttg
ggaggatgccacacggctgtattgacccgagatacgctccggatcgttcaagcaccgtcg
ggagcgttgacggcgggtcccatacaacaccgatttgtcgctctaggcaggcgaggagaa
ggcactcgtcacgacgtttcatcggaaacagaggtcgacgaagggacgcccgacagagag
cgcaaacgacgcttgagcgaggcggtttcttcggtgaacgcggctagccaacatggcgtg
ctggtcgggggcggcagcagtctattgcaagcaatcgatggcttgcgcgatttcggcgag
acgaccccagagcagaaactcggacgtgagatcgtgtcggaagcgctgcgcgcgccggca
acgcgactgattgataacgccagtcaaaatgggcggtccaccgttgatgccctgctcggc
gactttcagacgaattgcgggttcgatgctagctcgggcatcgtcaccgacttgctcaaa
ttgggggtcctcgacgcgacagacgtcgtgagggcggcactttcgagcgcttcttcaatc
gccggactgatgtctctcaccgaaacactggtcctgcaagaagccgagcaccattcaaaa
gtgacgtattttcgattgtga
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