Acinetobacter baumannii ZW85-1: P795_11455
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Entry
P795_11455 CDS
T02954
Name
(GenBank) hrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
abaz
Acinetobacter baumannii ZW85-1
Brite
KEGG Orthology (KO) [BR:
abaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abaz03019
]
P795_11455
Enzymes [BR:
abaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
P795_11455
Messenger RNA biogenesis [BR:
abaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
P795_11455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
NACHT
PhoH
AAA_30
TsaE
SLFN-g3_helicase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHB92016
LinkDB
All DBs
Position
complement(2479455..2483312)
Genome browser
AA seq
1285 aa
AA seq
DB search
MLNGLNIDQWVMARDRYRLNRLRKDKKANTAEIEKLFEQSNAKVRQRFERLPKIKLNQDL
PVTQYADRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIID
EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVE
VRYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQ
EIRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNI
RYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSR
PEFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN
ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQADQK
HALFREADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVE
LAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKT
NTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQIS
LFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKL
RRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLNDRPTT
QQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEA
LLKALPKDKRRNLVPIPDTARKLIQGIDAVHLRQHIFSYLAFALRGEQITEKDFSFERID
PYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKGEFKTFPENFTFEASQKV
TGVVVKQYQALVPTKNFAELEAKDESGVVIQTFNDQAEAIKQHREGIIRLVHMQLGDLVR
QLKKQISKPLALAYSPLGDKAKLEQMLVYATLQMAITTLPINADEFNKLLDQVKKQFLSY
GQQALEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDDIEDQLDLMSLGNFVYCQPVDLWQE
YPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKVFKFKNDPRIKELYLMLEELRISLF
SQPMKTKMPISPTRLQKLWDRLGIS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatggtttaaatatagatcaatgggtgatggcaagagatcgttaccgtttaaat
cgtttacgtaaagataaaaaagccaatactgcagagattgaaaaattatttgaacagtct
aatgcaaaagttagacagcgttttgaacgcttaccaaaaatcaaattaaatcaggatctt
cctgtaacccaatatgctgaccgtttaatagaagcgattcaaaagcatcaggtcattatt
gtggcaggtgaaacaggatcagggaaaactactcagctcccccaaattgcaatgttagca
gggcgtggcttgactggtatgattggtcatacccagccacgtcgtttagctgcacgtagt
gtgtcgcagcgtattgcagaagaagtcggcgaaaaacttggcgagtcaattggttttaaa
atccgttttaatgaacaaggttcgcaagattcgattgtccggttaatgaccgacggtatt
ttgcttgccgagttaggcaatgaccgcttcttgtctaaatatgacaccattattattgat
gaggcgcatgagcgctcactcaatatcgattttattatgggctatttaaagcagttactg
ccaaaacgcccagatttaaaagtcatcgtgacttcggcaactttagatgtaaatcgtttt
agtaactactttaataatgcaccaatttttgaagtagaagggcgtagttatccggtcgaa
gtgcgttatcgtccaatttcagaaatgaatattggtggtagtgatgacgacgagttcgac
gactttgaagaaaacctgccgcgtgcagtcgtacaagctgtagaagaatgctttgctgat
gccgaagaaaaaggccatccagaacatgcagatattctgattttctcaagtacagagcaa
gaaattcgagaattgcaggaaaccttacaaaagtacgggccgagacataccgaaatttta
cctttgtatgcacgcttagccgtttctgagcaacaaaagatttttagcccaagtggaaag
ggccgccgtattattattgcgacaaacgttgcagaaactgcactgactgttcctaatatt
cgctacgtgattgatagcggctttgcacgtatatctcgttataactaccgctcacgcgtg
caacgcttaccgattgaggcaatttcacaagctgcagcaaatcaacgtaaagggcgttgt
ggtcgtgttgctccaggtgtttgtattcgtttatatagcgaagaagactttttaagtcgt
cctgagtttaccgaacctgaaattaagcgaaccaatttggcatcggttatcctgcaaatg
cagagcttaggtttaggtgagctggaaaactttgatttcattgagccgccagatttccgt
ctagtcaatgatggtcgtaagctactcattgagttaggcgcacttaacgagaagaaaaat
gaactgaccaaagttggccaaatgatggcacgtatgccgattgatccaagactcgcacgt
atgattgtgggtggtgctcattttggtgtactcaaagaaattttggtggtggtcagtgca
cttgcagttcaagacccgcgtgaacgtccagcagataaacagatgcaagctgatcaaaag
catgcattattccgcgaagcagattcagattttctgttttatttaaaactttgggatact
ttaaatcctaaaggtgaagcaggaatgtcggaaaacaagcgtcgtcaatttgctaagcag
catttcttaagctggttacgtttacgtgaatggaaacagacacaccagcagctagttgag
ctggccgaaggtttaaaacttagttttaatgaaaagcctgcaaattatgaaaatttgcac
cgtgcgttgctgacaggtttattatcttttattgctaataaaactgatgagcgtaatacc
tttatggcggtgcgtcagcaaaaggctaaagtttttccggccagtactttacataaaacc
aatactgcgtgggtgatggcttttgagatggtggaaacctctcaggtctatttacgtaca
ttagcaaaaattgatcctgaatggattttgcttgctgcacgcgacttattgaaatatcac
tatttcgagccgcattggtctaaaaaagctggtattgtaaatgcttatgcacaaatttca
ttgtttggtttaattattgaaccgaagcgtttggttaattttgagaaagttgatcaacct
gctgcacatgagattttcttacgtgatgcattaaccacaggaaatctgggtacagttcca
ccatttttaaaacataacttgcttaaacttgaagaagtagagcgagttgaagataaatta
cgtcgccgcgatttggtggttgatgaagaaacgatttatcagttctatgcgtcgaaaatt
cctgaagaaattgcgagtcgtcgtagttttgaagactggcgtgcaaccgtagaagcaaaa
aatccgcgttatttatacgtggaagatgatgcgctttggctcaatgaccgtccgaccacg
cagcaattccctgatcatttacataatggtcaattacgcttggcaactacttatcgcttt
gacccaagtcatgatgaagatggcgcaacggtccaaattccggtacaggcattgccacag
gtagatgaaaatatttggtcgtgggggattccaggctggcgtttagatctcattgaagcc
ttattgaaagccttaccaaaagataaacgtcgtaacctcgtaccgattccagatacggcg
cgtaagctcatacaaggtattgatgctgtacatttgcgacaacatatctttagctatctg
gcgtttgctttacgtggtgagcagattacggaaaaagatttttcatttgaacgcatagat
ccgtatttggtgccttttattaaggtaattgatgaaaaaggtaaattgatcgctaaaggt
cgtgacttggctgagttgaaggctcgttgtcgcgtagaaacgcatcgtccggtgaaacag
caaaaaggtgaatttaaaaccttccctgaaaactttacctttgaagcttcacagaaggtg
acaggtgttgttgttaaacaatatcaagctttagtaccaactaaaaattttgccgaactt
gaggcgaaagatgagtccggcgtggttatacaaacatttaacgatcaggcagaggcgatt
aaacagcatcgagaaggtattattcgtctggtccatatgcaacttggcgatttggttcgc
cagttgaaaaagcagatttcgaaaccgcttgcgttggcttattcacctttaggcgataaa
gctaaacttgagcaaatgctggtatacgcgactttacaaatggcaattacgactttgcca
attaacgctgatgaatttaataagctgctagatcaggtcaaaaagcaatttttgagttat
ggtcagcaagcacttgagcaattaagtgatatttatattcagtggcaacaaatccgtcgt
caacttttagtacttgatccggacgtatttggacgcagtatcgatgatattgaagatcag
ctagatttaatgtcactcggcaattttgtctattgccagccagttgatctttggcaggaa
tatccacgttatttaaaagcgctgctattgcgtttagatcgattgccaaataatctacag
cgagatcatgctgctattgacgatgtcgatccatggatggacaaggtatttaagttcaaa
aatgatccaagaatcaaagaattgtatttgatgctggaagaattacgtatttctttattt
tctcagccgatgaaaaccaagatgcctatttcgccaactcgactacaaaagttatgggat
cgtttgggaatcagttaa
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