Acinetobacter baumannii AB307-0294: ABBFA_00471
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Entry
ABBFA_00471 CDS
T00795
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
abb
Acinetobacter baumannii AB307-0294
Pathway
abb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABBFA_00471 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abb03019
]
ABBFA_00471 (rnr)
03016 Transfer RNA biogenesis [BR:
abb03016
]
ABBFA_00471 (rnr)
Enzymes [BR:
abb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ABBFA_00471 (rnr)
Messenger RNA biogenesis [BR:
abb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABBFA_00471 (rnr)
Transfer RNA biogenesis [BR:
abb03016
]
Prokaryotic type
tRNA degradation factors
ABBFA_00471 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
ATY42937
UniProt:
A0A5K6CM89
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All DBs
Position
complement(490916..493348)
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AA seq
810 aa
AA seq
DB search
MKPNDMTKNWVDPEAKAEAERYDNPIPSRTLILDTLEQLQTPQSHAELVDHFHIQDQKSI
EALSHRLSAMVRDGQLMKDGFKFQLVADQPTYEATVYINSKGLGTAHIDGQDDLLLPERE
LRLVFNGDRVRVRQTSVDRKGKPWGFITEVIQHRVKQLIGKLSVHDGEYFIQPNNPNQHQ
PIPLEKELVEHAKANVGDMLRVAIDTYPTREEFATAHIIQSMADKADTEIIIPQTILEFG
LPYEFPDEVIKEAESFKEPAEQDREGRVDLRDLALVTIDGEDARDFDDAVYAEKRPGGGY
RVVVAIADVSHYVRLDSALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCM
VCDLKLSRTGRVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPKDRDIHKSLNTLFQL
YQILKNLRVDRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEY
ALEHDIPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQKVIEATKDRIDAPSI
HAVLLRSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKQKPYPLSG
AALDDAGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFIGIVSAVTEFGLFVTLKDL
YVDGMIHISQLGDDFFIYDQASQNLIGQNRGQVFGLGDEVKIQVAGVNLEERKIDFQLIK
QVTHAGRVVRSRAPRTTKTSTQATEEVFGKPSVSTDGEKPVRKKKEKGKPSSYSKKSGKK
TSTKAEAKPEKVKKKAKPKKKKSNAKSKAD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaacgacatgacaaaaaactgggttgaccccgaagcaaaagccgaagctgaa
cgttatgacaatcctattccaagccgtactcttattttagatacgttggaacaattgcaa
acaccgcaatctcatgcagaacttgttgaccattttcatattcaagatcagaaaagtatt
gaagccttaagtcatcgcttaagtgctatggttcgtgatggccaacttatgaaggatggt
tttaagtttcagttggtggcagaccaacctacctatgaagcaactgtctatattaatagt
aaaggtttgggtacagcacatattgatggtcaagatgatttgttattacctgagcgtgag
ttacgtttagtctttaatggtgatcgggtccgtgttcggcagacatcggtagatcgcaaa
ggtaaaccgtggggtttcattaccgaagttatacagcatcgtgtaaaacagttaattggt
aaattgtcggtacatgacggcgaatattttattcagcccaacaatccaaatcagcatcaa
cctatccctctagaaaaagaattggttgaacatgctaaagcaaatgtcggcgatatgctt
cgtgttgctatagacacttacccaacccgggaagaatttgcaacggcacatattattcag
tctatggcagataaagccgatactgaaattattatcccgcagaccattttagagtttggt
ttgccttacgaatttccagatgaagttataaaagaagctgaaagtttcaaagaacctgct
gaacaagatcgcgaaggtcgagttgatttaagagacttggcacttgtcacaatcgatggt
gaagatgcgcgagatttcgatgatgcagtatatgcggaaaaacgtcctggtggtggttac
cgagttgtcgttgcaattgccgatgtgagccattatgtacgtttagattcggcactaaat
gaagaagctgaagagcgcggcacttcggtttatttcccacattttgttttaccaatgcta
ccagaagcattatcaaatggattgtgctcacttaacccacacgtagatcgtctatgcatg
gtctgtgacctaaaactttctcgtacgggtcgtgttacaggttatgaattttatccggca
gtcatgcattcaaaagcacgtttgacctatacacaagtaggacaatattttgaaggtgca
actgatgcaattccaaaagatcgtgatattcataaatcgctaaatacacttttccagctt
taccagattttgaaaaacttacgtgttgatcgtcatgcaatggagtttgaaaccattgaa
acttatatgacctttgacgagttaggtggaattaaagaaattttacctcgtacacgtaat
gatgctcataagcttattgaagagtgtatgttgcttgccaatgtagcagcagcagaatat
gccttagaacatgatattccgatgttgtatcgtgtacatgaggcacctgaattctcacgt
attcaaaaagtaaaagattttgtaaaactattgggtttacctttccctgaccaaccaact
caggcagattatcaaaaagttattgaggcaactaaagaccgtattgatgcgccaagcatt
cacgccgtgttattacgctcaatgatgcaagcttactatggtgccaaaaatgcaggtcac
tatggtctagcttatgaagcttatacacatttcacttcaccaattcgccgctacccggac
ttattgttacatcgtgcaattaaagctcatctaaaacaaaagccttacccactttccggt
gcagctttagatgatgcaggtgaacatttctctcaaacagaacgccgtgccgatgaagca
tcccgcagcgtaacgacttggttgaaatgtcactatatgcaacaacatttaggtgatgag
ttcattggtattgtgagtgcggtaactgaatttggcctatttgttactcttaaagatctt
tatgttgatggcatgattcacattagccaacttggcgatgatttctttatttacgatcaa
gctagtcaaaacctcattggacaaaatcgtggtcaagtcttcggtttaggcgatgaagtt
aaaattcaagttgctggtgtaaatctagaagagcgtaaaatcgatttccaactcattaaa
caagttactcatgctggacgtgtagttcgtagtcgcgctccacgcacaaccaaaacaagc
acccaagcaacagaagaagtttttggtaaaccgtctgtatcaactgatggtgaaaaacct
gtccgtaaaaagaaggaaaaaggcaaaccaagctcatatagtaaaaagtctggtaagaaa
acctctacaaaagcagaggctaaaccagaaaaagtaaagaaaaaagcgaaacctaaaaag
aaaaagtcaaacgccaagtctaaggctgactaa
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