Acinetobacter baumannii AB307-0294: ABBFA_00624
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Entry
ABBFA_00624 CDS
T00795
Symbol
rtcB
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
abb
Acinetobacter baumannii AB307-0294
Brite
KEGG Orthology (KO) [BR:
abb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abb03016
]
ABBFA_00624 (rtcB)
Enzymes [BR:
abb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ABBFA_00624 (rtcB)
Transfer RNA biogenesis [BR:
abb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ABBFA_00624 (rtcB)
Prokaryotic type
tRNA splicing ligases
ABBFA_00624 (rtcB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ATY43081
UniProt:
A0A5K6CMM8
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All DBs
Position
complement(653997..655202)
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AA seq
401 aa
AA seq
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MGIQKILNEEAQYGVPVKIFTQDIDSESIEQLKKMAQLRFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLEPIIKKHPGLVRMLRQFEATWQKQLGTLGGGNHFIELCIDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSQSFNDYVEAVEWAQEY
AFENRKEMMRLILEAIRPLLPSFQMTKEAINCHHNYVSQETHFGENLFVTRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDSGVVDEIPSAYKDIDEVIANQADLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaagatattaaacgaagaggcacaatatggtgtccccgttaaaattttc
actcaagacatagatagtgaaagtattgaacaactcaagaagatggcacaactgcgattt
atatattctcatattgctgttatgcctgatgtgcatgttggaaaaggtgcaactgtaggc
agcgtcattcctactaaacatgccattattccagctgcagtgggtgtagatattggctgc
ggaatgaatgctattcgtttgagcctgaaagcttcacaacttccagataacttaagtcgc
ttgcgggacgccattgaacggaaagtgccggttggatttgctttgcataaacaagtcaaa
gcgaaagcttctagcattattccacttgaaaaacgcttagaacctattattaaaaagcat
ccgggtcttgtccgaatgcttcgtcagtttgaggcaacatggcaaaaacagttgggcact
ttaggcggcggtaatcactttatagagttatgtattgatgaaaatcaagatgtatgggtg
atgctccattcgggcagccgaggtcttggtaacgtcataggtacttattttattgagtta
gccaagaaagaggcacaacatcgctttgggcacgtgcctgataaagatttaagttatttt
gctgaaggctcgcaaagctttaatgattatgtagaagccgtagagtgggctcaagaatat
gcttttgaaaatcgtaaagaaatgatgcgattaatattagaagcaattcgccctcttcta
ccttcttttcaaatgacgaaagaagcaatcaattgtcaccataactatgtgagtcaagaa
acacactttggtgaaaacctttttgttacaagaaaaggggcaattcgagcaggtttagat
gagttaggaattattccaggttctatgggagcacgctcgtatattgttaaaggtaaagca
aaccctgaatctttttgttcctgttctcatggagctggccgcaaaatgagccgaagcaaa
gcaaaagttctttttaatcagcaggacttgattgaacaaacacaagggattgaatgccgt
aaagacagtggtgtagtcgatgaaattccaagtgcctataaagatattgatgaggttata
gccaatcaggcagatctcattgaagtcgttcatactcttaaacaagttttatgtattaaa
ggttaa
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