KEGG   Acinetobacter baumannii AB307-0294: ABBFA_01334
Entry
ABBFA_01334       CDS       T00795                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
abb  Acinetobacter baumannii AB307-0294
Pathway
abb02024  Quorum sensing
abb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABBFA_01334 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ABBFA_01334 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abb03019]
    ABBFA_01334 (hfq)
   03036 Chromosome and associated proteins [BR:abb03036]
    ABBFA_01334 (hfq)
Messenger RNA biogenesis [BR:abb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ABBFA_01334 (hfq)
Chromosome and associated proteins [BR:abb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ABBFA_01334 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ATY43770
UniProt: A0A5K6CQD4
LinkDB
Position
1457181..1457687
AA seq 168 aa
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGG
FGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFDNDSKFEDGQDDENNR
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtctaaaggtcaaactttacaagatccgttcttaaattctctccgtaaagaacgcatc
ccagtttctattttccttgttaacggtattaaattacaaggtcatattgaatcttttgac
caatatgttgttttattaaaaaatactgtaagtcaaatggtttacaaacacgcaatttct
acagttgttccagctcgtaacccacgtccagcaggtgcacaaggtgcaggtttcccagct
cagggtggtagtcaaggtggcttcggtggtcaaggcgctggctttggtggtgctcaaggt
gctggctttggtggtcaaggcggcttcggtggtcaaggcggcttcggcggtcaaggcggc
ttcggtggtcaaggcggcttcggtggtcagggcggcttcggtggtcaaggcggcttcggt
ggtcaaggcggcttcggcggacatcaaggcggttttgataacgattctaaatttgaagat
ggtcaagacgacgaaaacaatcgttaa

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