Acinetobacter baumannii AB307-0294: ABBFA_03219
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Entry
ABBFA_03219 CDS
T00795
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abb
Acinetobacter baumannii AB307-0294
Pathway
abb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABBFA_03219 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abb03021
]
ABBFA_03219 (rpoC)
03400 DNA repair and recombination proteins [BR:
abb03400
]
ABBFA_03219 (rpoC)
Enzymes [BR:
abb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABBFA_03219 (rpoC)
Transcription machinery [BR:
abb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABBFA_03219 (rpoC)
DNA repair and recombination proteins [BR:
abb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABBFA_03219 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ATY45632
UniProt:
A0A5K6CUV5
LinkDB
All DBs
Position
complement(3454644..3458816)
Genome browser
AA seq
1390 aa
AA seq
DB search
MRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDGLFCAKIF
GPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIWFLKSLPS
RIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFTALEEHGDEFVAKMGA
EAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPEWMVMNVL
PVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQES
VDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLR
LHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASVIRQHPVM
LNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLEAQLEARA
LMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNRALATGQV
AIHARVKVRVHQTVINENGEREQQTIIVDTTPGRCLLWEVVPEGLSFDMINLEMTKKNIS
KLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKHTIIDKAETEVR
EIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEKQKSFNSI
YMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTHGARKG
LADTALKTANSGYLTRRLVDVAQDLVITEPDCGTSGGLVMTPFIQGGDVIEPLRDRVLGR
VTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVCAKCYGRD
LARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNKGTVRFHN
VKTVQHAKGHLVSVSRSGEIGIADELGRERERYKLPYGASILLKDGELVEAGGIVATWDP
HTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLRPAIVLDT
TDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADLFEARKPK
EHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHVNRGETIS
DGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKVDIIDGGD
TSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAASFQETTRV
LTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHALHNDFSEVDQA
FSQALNSEQF
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagaaaacggactcagatggtcatgcgccagttgagttcgaccgtatccgtatt
ggtcttgcgtcaccagaaatgattaagtcatggtctcatggtgaagttaaaaaacctgag
acaatcaactatcgtacgttcaaaccagaacgtgatggtttgttctgtgccaaaatcttt
ggtccagtaaaagattacgaatgcttgtgtggtaaatacaagcgtatgaaatacaaaggc
gtcatttgtgaaaaatgtggcgttgaagtaactacagcaaaagttcgtcgtgaacgtatg
ggtcacattgagcttgcttctccagttgcacatatctggttcttaaaatcgttaccatcc
cgtatcggtttattacttgatatgacacttcgtgatatcgaacgtgtattgtatttcgaa
tcatacgttgttactgatcctggtatgacaccatttgaaaagtatcaacttcttaatgat
gaagaatactttactgctctagaagagcacggcgacgaatttgttgcaaaaatgggtgca
gaagcagttcaagacttgttgaaagacatcgaccttgaagctgaaatttcacgtttacgt
gaagaaattcctcaaacaacttctgaaacgaagttgaaaaaagcgtctaagcgcttgaaa
ttgatggaagcattcaaagactcaaacaacaagccagaatggatggtaatgaacgtactt
ccggtacttccaccagatttacgtccattagttccacttgaaggtggtcgtttcgcgact
tctgacttgaacgacttatatcgtcgtgtaattaaccgtaacaaccgtttgaagcgtctt
cttgaccttgcagcgccggacatcatcgtacgtaacgaaaaacgtatgttacaagagtct
gtagatgcgttgcttgataacggtcgtcgtggtcgtgcaattactggttctaacaaacgc
ccattaaaatctttggcagatatgatcaaaggtaaacaaggtcgtttccgtcagaacttg
ttaggtaagcgtgttgactactctggtcgttcggtaattactgtaggtcctactttacgt
cttcaccaatgtggtcttccgaagaaaatggcacttgaattattcaagccattcattttc
gcgaaattacaagcttcaggtcaggcaacaaccattaaagctgcgaagaaaatggttgag
cgtgagactccggaagtttgggacgttcttgcatctgtaattcgtcaacatccagtaatg
ttgaaccgtgcgccaacacttcaccgtttaggtcttcaagcatttgaacctattcttatt
gaaggtaaggcaatccgtcttcacccactcgtctgtgctgcgttcaacgccgacttcgac
ggtgaccaaatggcggtacacgttccattgacacttgaagcacagttagaagctcgtgca
ttgatgatgtcaacaaacaacatcttgtcaccagcaaacggtgagccaatcatcgttcct
tctcaggacgttgtcttgggtctttactacatcactcgtgatgcagtaaacgctaaaggt
gaaggcatggtgtttgcggatactcacgaagtaaaccgtgcacttgcaactggtcaagtt
gcgatccatgctcgtgttaaagtacgtgtgcatcaaacggttatcaatgaaaatggtgag
cgtgaacagcaaactattattgttgatacaacaccaggtcgttgcttactttgggaagtt
gttccagaaggtttaagctttgacatgatcaaccttgagatgactaaaaagaacatctct
aagttaatcaactcttgctaccgtaaacttggtttgaaagatacagttatcttcgctgac
caattaatgtacttgggcttccgtcaagcgactcgttcaggtgtatctgtaggtatggaa
gacatgttaattccacctacgaaacacacaattattgacaaagcggaaacagaagttcgt
gaaatcgaacaacagttcgaacaaggtttcgtaactgctggtgaacgttataacaaagtt
gtcgatatttgggcgcgtacaaacgaccaggttgctaaagcaatgatggataacttgtct
tatacacttgtgaaaaacaaacaaggtgaagacgagaagcaaaaatcattcaacagtatc
tatatgatgtctgactctggtgcccgtggtagtgcggctcagattcgtcagcttgcaggt
atgcgtggtttgatggcaaaaccggatggctcgattattgagactccaattaaagcgaac
ttccgtgaaggtttgacagtactccagtacttcatttcaacacacggtgcgcgtaaaggt
ttggccgatactgcattgaaaactgcgaactctggttacttgactcgtcgtcttgtagac
gtggcacaagacttagtaattactgagccagattgtggtacaagtggtggtctagtgatg
actccattcattcaaggtggtgatgtcatcgagccattacgtgaccgcgtattaggtcgt
gtaactgctgaagatgtacgtcgtgcatctgatgatgaagttgtattacctcgtggtacg
ttaattgacgagaaaatcgcggctcagcttgaagaggctggtgtcgatgaagttaaagta
cgttctgtaatcgcatgtgaatcaacattcggtgtatgtgcgaaatgttatggtcgtgac
cttgctcgtggacacttggtaaacccaggtgagtcagtaggtgtaatggctgcacagtca
atcggtgaaccaggtacacagttaacaatgcgtacgttccacgtgggtggtgctgcaagc
cgaacttctgctgcaaacagtgttcaagtacgtaacaaaggtactgtacgtttccataac
gtaaaaactgtacaacatgcgaaaggccacttggtttcagtttcacgttcaggtgaaatt
ggtattgccgatgagttaggccgtgagcgtgaacgctacaaacttccttacggtgcgagc
atcttgttgaaagatggtgagcttgttgaggctggtggtatcgttgcgacatgggatccg
catacgcatccattggtaacagaagttgctggtaaagcacgtttcagtcaaattgctgat
ggtgtaactgcaacatcgaaaactgatgatgcaactggtatgacaactgttgaaatcttg
cctgtaacagcacgtcctgcttctggtaaagatttacgtccagcaatcgtattagataca
actgatggcggtgaacagttctacttcttaccacaaaatacaattgtgactgttcgcgac
ggcgaaacaattggtgtgggtgacgttatcggtcgtgtaccacaagaatcttcacgtact
cgtgatattaccggtggtcttccgcgtgttgctgacttgttcgaagcacgtaagccgaaa
gaacatgcgatcttggcagaagtgtctggtatcgtaagcttcggtaaagagaccaaaggt
aagaaccgtttagtgattactccagatgacggttctgaaatttacgaagagttgattcca
aaatggcgtcaaatcaacgtgtttgaaggtgaacatgtgaaccgtggtgaaaccatttct
gatggtccacaaaatccacatgacatcttacgcttgaaaggtgaagttgctttaactaac
tacatcgtgaacgaagttcaagacgtttaccgtctccaaggtgtaaaaatcaacgataag
cacattgaagttatcgtacgtcaaatgttgcgtaaagttgatatcatcgatggtggtgat
acaagcttcatcaaaggtgaacaagtggattacatccgtgttgttcaagagaaccaagct
gtcttggctcagaacaagttccctgcgaagtttgaacgtcaattgatgggtattacgaaa
gcatcgctttctactgactcattcatctctgctgcatcgttccaggaaacaactcgtgtg
ttaactgaagcggctgtaacaggtaaagaagatgatttacgtggtttgaaagaaaacgtt
gtagtgggtcgcttgattccagcgggtactggtcttgcataccacttagagcgtcgtcgt
caagaagcggaagcagcagaacatgctcttcacaatgacttcagcgaagtagaccaagca
tttagccaagctttaaactcagaacaattctaa
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integrated database retrieval system
