Acinetobacter baumannii ACICU: ACICU_01184
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Entry
ACICU_01184 CDS
T00710
Name
(GenBank) HrpA-like helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
abc
Acinetobacter baumannii ACICU
Brite
KEGG Orthology (KO) [BR:
abc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abc03019
]
ACICU_01184
Enzymes [BR:
abc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACICU_01184
Messenger RNA biogenesis [BR:
abc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACICU_01184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
NACHT
PhoH
AAA_30
TsaE
SLFN-g3_helicase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACC56496
UniProt:
A0A7U3XZ22
LinkDB
All DBs
Position
1286423..1290280
Genome browser
AA seq
1285 aa
AA seq
DB search
MLNGLNIDQWVMARDRYRLNRLRKDKKANTAEIEKLFEQSNAKVRQRFERLPKIKLNQDL
PVTQYADRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIID
EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVE
VRYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQ
EIRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNI
RYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSR
PEFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN
ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQADQK
HALFKEADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVE
LAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKT
NTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQIS
LFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKL
RRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLNDRPTT
QQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEA
LLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALRGEQITEKDFSFERID
PYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKGEFKTFPENFTFEASQKV
TGVVVKQYQALVPTKNFAELEAKDESGVVIQTFNDQAEAIKQHREGIIRLVHMQLGDLVR
QLKKQISKPLALAYSPLGDKAKLEQMLVYATLQMAITTLPINADEFNQLLEQVKKQFLSY
GQQALEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDDIEDQLDLMSLGNFVYCQPVDLWQE
YPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKVFKFKNDPRIKELYLMLEELRISLF
SQPMKTKMPISPTRLQKLWDRLGIS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatggtttaaatatagatcaatgggtgatggcgagagatcgttaccgtttaaat
cgtttacgtaaagataaaaaagccaatactgcagagattgaaaaattatttgaacagtct
aatgcaaaagttagacagcgttttgaacgcttaccaaaaatcaaattaaatcaggatctt
cctgtaacccaatatgctgaccgtttaatagaagcgattcaaaagcatcaggtcattatt
gtggctggtgaaacaggttcagggaaaactactcagctccctcaaattgcaatgttagca
gggcgtggcttgactggtatgattggtcatacccagccacgtcgtttagctgcacgtagt
gtgtcgcagcgtattgcagaagaagtcggcgaaaagctcggcgagtcaattggttttaaa
atccgttttaatgaacaaggctcgcaagattcgattgtccggttaatgaccgacggtatt
ttgcttgccgagttaggaaatgaccgcttcttgtctaaatatgacaccatcattattgat
gaagcgcatgagcgctcactcaatatcgattttattatgggttatttaaagcagttactg
ccaaaacgcccagatttaaaagtcatcgtgacttcggcaactttagatgtaaatcgtttt
agtaactactttaataatgcaccaatttttgaagtagaagggcgtagttatccggttgaa
gtgcgttatcgcccaatttcagaaatgaatattggtggtagtgatgacgacgagttcgat
gactttgaagaaaacctgccgcgtgcagtcgtacaagctgtagaggaatgctttgctgat
gccgaagaaaaaggccatccagaacatgcagatattctgattttctcaagtacagagcaa
gaaattcgagaattgcaggaaaccttacaaaagtacgggccgagacataccgaaatttta
cctttgtatgcacgcttagccgtttctgagcaacaaaagatttttagcccaagtggaaag
ggccgccgtattattattgcgacgaacgttgcagaaactgcactgactgttcctaatatt
cgctacgtgattgatagcggctttgcacgtatatctcgttataactaccgttcacgcgtg
caacgcttaccgattgaggcaatttcacaagctgcagcaaatcaacgtaaagggcgttgt
ggtcgtgttgctccaggtgtgtgtattcgtttatatagcgaagaagactttttaagtcgt
cctgagtttaccgaacctgaaattaagcgaaccaatttggcatcggttattctgcaaatg
cagagcttaggtttaggtgagctggaaaactttgatttcattgagccgccagatttccgt
ctagtcaatgatggtcgtaagttgctcattgagttaggcgcgctgaacgagaagaaaaac
gaactgaccaaagtcggccaaatgatggcacgtatgccgattgatccaagactcgcacgt
atgattgtgggtggtgctcattttggtgtactcaaagaaattttggtggtggtgagtgca
ctcgcagttcaagacccgcgtgaacgtccagcagataaacaaatgcaagctgatcaaaag
catgcactattcaaagaggcagattcagattttctgttttatttaaaactttgggatact
ttaaatcctaaaggcgaagcaggaatgtcggaaaacaagcgccgtcaatttgctaagcag
catttcttaagttggttacggttacgtgaatggaaacagacacaccagcagttagttgag
ctggccgaaggtttaaaacttagttttaatgaaaagcctgcaaattatgaaaacttgcac
cgtgcgttgctgaccggtttattatcgttcattgccaataaaactgatgaacgtaatacc
tttatggcggtgcgtcagcaaaaggctaaagtttttccggccagtactttgcataaaacc
aatactgcgtgggtgatggcttttgagatggtggaaacctctcaagtctatttacgtaca
ttagcaaaaattgatcctgaatggattttgcttgctgcacgcgacttattgaaatatcac
tatttcgaaccgcattggtctaaaaaagccggtattgtaaatgcttatgcacaaatttca
ttgtttggtttaattattgaaccgaagcgtttggttaattttgaaaaagttgatcaacct
gctgcacatgagattttcttacgtgatgcattaaccacaggaaatctgggtacagttcca
ccatttttaaaacacaacttgcttaaacttgaagaagtagagcgagttgaagataaatta
cgtcgccgcgatttggtggtcgatgaagaaacgatttatcagttctatgcgtcgaaaatt
cctgaagaaattgcgagtcgtcgtagttttgaagactggcgtgcaaccgtagaagcaaaa
aatccgcgttatttatacgtggaagatgatgcgctttggctcaatgaccgtccgaccacg
cagcaattccctgatcatttacataatggtcagttacgcttggcaactacttatcgcttt
gacccaagtcatgatgaagatggcgcaacggtccaaattccggtacaggcattgcctcag
gtagatgaaaatatttggtcgtgggggattccaggctggcgtttagatctcattgaagcc
ttattgaaagccttaccaaaagataaacgtcgtaacctcgtaccaattccagatacggcg
cgtaagctcatgcaaggtattgatgctgtacatttgcgacaacatatctttagctatctg
gcgtttgctttacgtggtgagcagattacggaaaaagatttttcatttgaacgcatagat
ccgtatttggtgccttttattaaggtgattgatgaaaaaggtaaattgatcgccaaaggc
cgtgacttggctgagttgaaggctcgttgtcgcgtagaaacgcatcgtccggtgaaacag
caaaaaggtgaatttaaaaccttccctgaaaactttacctttgaagcttcacagaaggtg
acaggggttgttgttaaacaatatcaagctttagtgccaactaaaaattttgccgaactt
gaggcgaaagatgagtctggcgtggttatacaaacatttaacgatcaggcagaggcgatt
aaacagcatcgagaaggtattattcgtctggtccatatgcaacttggcgatttggttcgt
cagttgaaaaagcagatttcgaaacctcttgcgttggcttattcacctttaggcgataaa
gctaaacttgagcaaatgctggtatacgcgactttacaaatggcaattacgactttgcca
atcaatgctgatgaatttaatcaactgctagaacaggtcaaaaaacaatttttgagctat
gggcagcaagcacttgagcaattaagtgatatttatattcagtggcaacaaatccgtcgt
caacttttagtacttgatccggacgtatttggacgcagtatcgatgatattgaagatcaa
ctcgatttaatgtcactcggcaattttgtctattgccagccagttgatctttggcaggaa
tatccacgttatttaaaagcgctgctattgcgtttagatcgattgccaaataatctacag
cgagatcatgctgctattgacgatgtcgatccatggatggacaaggtatttaagttcaaa
aatgatccaagaatcaaagaattgtacttgatgctggaagaattacgtatttctttattt
tctcagccgatgaaaaccaagatgcctatttcgccaactcgactacaaaagttatgggat
cgtttgggaatcagttaa
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