Acinetobacter baumannii TCDC-AB0715: ABTW07_0479
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Entry
ABTW07_0479 CDS
T01908
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abd
Acinetobacter baumannii TCDC-AB0715
Brite
KEGG Orthology (KO) [BR:
abd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abd03032
]
ABTW07_0479 (topA)
03400 DNA repair and recombination proteins [BR:
abd03400
]
ABTW07_0479 (topA)
Enzymes [BR:
abd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABTW07_0479 (topA)
DNA replication proteins [BR:
abd03032
]
Prokaryotic type
DNA Topoisomerases
ABTW07_0479 (topA)
DNA repair and recombination proteins [BR:
abd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABTW07_0479 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_C_rpt
DUF7351
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ADX90916
LinkDB
All DBs
Position
531068..533704
Genome browser
AA seq
878 aa
AA seq
DB search
MANTSRSASQSTASSASAAHKRALVIVESPAKAKTINKYLGSQYIVKSSVGHVRDLPTGG
SKATEKKPAARTKLTEAEKEQKANQALINRMGVDPEHGWQAHYEVLPGKENVVAELKKLA
KDADAIYLATDLDREGEAIAWHLREVIGGDDSRYHRVVFNEITKNAIQEAFKQPTRLDLN
RVNAQQARRFLDRVVGFMVSPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYW
QVFADTKAKKDDIRLEAVKQAGKTLKLKNKAETDALLDVLKGAEYKVAQREDKPTKVNPS
APYITSTLQQAASTRLGFSVKKTMMLAQRLYEAGFITYMRTDSTFLSDDAVSMVRAHIES
QYGEKYLPAKPNRYGNKAGAQEAHEAIRPSNVALTGDQLAGVERDAQRLYDLIWRQFVAC
QMTPAEYLSSTLTVEAGNVELKAKGRTLVFDGFTKVRGANKSDDDIILPAIKVGEILKLE
KLDPSQHFTKPPARFTEASLVKELEKRGIGRPSTYAAIISTIQERGYVKLENRRLFAEKM
GEIVTDRLDESFNNLMNYAFTADLEGQLDRVATGERNWKELLDTFYGDFKKRLTNAQGEQ
GMRRNQPVEVPAVHCPECSRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVESLAA
LSDDDSAETADLMSKHRCPKCGTAMDSYVIDGGRKLHVCGNNPDCDGYELEEGEFKIKGY
DGPTIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKNGQPAPPRVEPIKMEHLRSTKH
DDYFVLRDGAAGLFLAASKFPKIRETRAPKVAELRSVADQLDPKYQFILQAPDVDPEGNP
TIVKFSRKNQSQYVGSETPEGKQTKWSLIYQDGKWIEG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacctcgcgctctgcatctcaaagcacagcatcttctgcctctgctgcacat
aaacgtgccttagtgattgtggagtcgcctgccaaagcgaaaaccatcaacaaatattta
ggttcgcagtacattgttaagtcttctgtaggtcacgtacgtgacttgccaacaggcggc
agtaaagcaacagagaaaaagccggctgcccggaccaaactcactgaggctgaaaaagaa
caaaaagcgaatcaggctttaatcaatcgtatgggcgtcgatccggaacatggatggcaa
gcgcattacgaagttctgcctggcaaagaaaatgttgttgctgaactaaagaaacttgct
aaagatgcagatgcaatctatctcgcaacggacttggatagagaaggggaagcaatcgct
tggcacttacgcgaagtgattggtggtgacgatagccgttatcatcgtgtggtatttaac
gaaattaccaaaaatgccattcaagaagcatttaaacagccaacacgtctcgacttaaac
cgtgttaatgcacaacaagcacgtcgtttcttggaccgtgtagtaggcttcatggtttcg
ccattattatgggaaaagattgcccgtggtttatcggcaggtcgtgtacagtctgtagcg
gtaaagcttgttgttgaacgtgaacgtgaaattcgtgcttttattccagaagaatattgg
caagtctttgcagacactaaagctaaaaaagatgacattcgtcttgaggctgttaaacag
gcgggtaaaacacttaaattaaaaaataaagctgaaacagatgccctgttagatgtatta
aaaggtgctgaatataaagttgcccagcgtgaagataaaccaactaaggtgaatccaagc
gccccatacatcacgtcgactttgcaacaagctgcaagtacacgtttaggtttctctgta
aagaaaaccatgatgttggcgcagcgcttgtatgaagctggtttcattacttatatgcgt
actgactcaacgtttttgagtgatgatgctgtaagtatggtacgtgcgcatattgaaagc
caatatggcgaaaaatatttaccagctaagccaaatcgctatggtaataaagcaggtgct
caagaagcccacgaagctattcgtccatcaaatgttgcgctgactggtgatcaacttgct
ggtgtagagcgtgatgctcagcgtttgtatgatttaatttggcgtcagttcgtagcttgc
caaatgactccggcagaatatttatcttcaactttaacagttgaagctggcaatgttgag
ttaaaggcaaaaggccgtacgcttgtatttgatggctttactaaagttcgtggtgccaac
aaatctgatgacgatatcattttacctgcaattaaagtgggtgaaattttaaagctagaa
aagctagatccaagtcagcattttaccaaaccaccagctcgttttactgaagcatcttta
gtaaaagaacttgaaaaacgtggtattggtcgtccgtcgacttatgctgccattatttct
actattcaagaacgtggttacgttaagttagaaaatcgccgtctctttgccgagaaaatg
ggtgagatcgtaacggatcgtcttgatgaaagttttaataacctgatgaactatgcattt
acagcagaccttgaaggtcagttggaccgtgtagcaacgggtgagcgtaactggaaggaa
ttgctagacacattctatggtgattttaaaaagcgtttgaccaatgctcaaggtgagcag
ggaatgcgtcgtaaccagccagttgaagtaccagcagtacattgccctgaatgttcacgt
ccaatgcagattcgtacgggcactacaggcgtattcttagggtgttctggctataacttg
ccgcctaaggaacgctgtaaagggaccttgaacttaacgccagttgagtctctagcagcg
ttatctgatgacgatagtgctgaaacagcagacttgatgtcaaaacatcgttgtccgaaa
tgtggcacggcaatggacagctacgtcattgatggtggccgtaagttacatgtttgtggt
aacaacccggattgcgatggctatgagcttgaagaaggcgagttcaagatcaaaggttat
gatggcccaaccattccttgtgataaatgtgatggtgaaatgcagcttaagactggtcgc
ttcggcccatatttcgcttgtacaagctgtgacaatactcgtaaagtcttgaaaaatggt
caacctgcaccaccacgtgtagaaccaatcaagatggaacacttgcgttcaaccaagcat
gatgattattttgtgttacgtgatggcgcggctggtctgttcttggctgcaagtaagttc
ccgaaaattcgtgaaacacgtgcaccaaaagttgctgagcttcgtagcgtagctgatcaa
cttgatccaaaataccagtttattttacaagctccagatgtagaccctgaaggtaaccca
accattgtgaagtttagtcgtaagaaccaatcacaatatgtgggttctgaaacaccagaa
ggtaaacaaaccaaatggagcctaatttatcaagacggtaaatggattgaaggctaa
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