KEGG   Trichophyton benhamiae: ARB_00210
Entry
ARB_00210         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
abe  Trichophyton benhamiae
Pathway
abe03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    ARB_00210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abe03021]
    ARB_00210
   03019 Messenger RNA biogenesis [BR:abe03019]
    ARB_00210
Transcription machinery [BR:abe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     ARB_00210
Messenger RNA biogenesis [BR:abe03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     ARB_00210
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_9
Other DBs
NCBI-GeneID: 9519428
NCBI-ProteinID: XP_003013392
UniProt: D4AVJ6
LinkDB
AA seq 251 aa
MAEVQRIADRIVSPGTPRDPNFTKFAFSDFVAKSFSFALASDVPVCKAYREGHCPLGPLC
AERHPTPSRISTSSSPAIAPSSTHGSLVCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSF
SRNGFCPNGDDCLYQHLSGDAKLPQCEHYDQGFCPLGPICAKRHVRRKLCRFYLAGFCPA
GKTCTEGAHPRWSENLPKPTVRVEKTQEEIESERARIREEQEREEEREREWRRENRGRDG
RYPRGRYRGKR
NT seq 756 nt   +upstreamnt  +downstreamnt
atggccgaagtccagagaatcgcagatcgaatagtctcgcctggaacgcctcgagacccc
aatttcaccaagtttgccttttcagacttcgttgccaaatcctttagctttgcccttgct
tccgatgtgccggtttgcaaggcctaccgtgaaggccactgtccgctcggcccgctctgt
gcagagagacacccgactccatctcgcatatcgacctcttcgtctcccgcgatagcccct
tcgtccacacatgggagtctggtatgcaagcattatctcaaggggctgtgcaagaaaggg
ctgaaatgcgaatatctacacgagtacaacctgcggcggatgccagaatgtcagtccttc
tcccgtaacggattttgtcccaacggggacgactgtctgtaccagcatctctctggtgat
gcaaagctgccgcagtgcgaacattatgatcaagggttctgtccgttgggtcctatctgc
gccaaacggcatgtgaggaggaagctgtgtcggttttatcttgcgggtttctgtcctgct
gggaagacgtgtactgagggtgctcatccgcgctggtcagaaaacttgcccaaaccgacc
gtcagagtggaaaagacgcaggaggagattgagagtgaacgagcaaggatcagagaggaa
caggagcgggaggaagagcgggagagagagtggaggagagagaaccgtggtcgagatggc
agatatccacgaggacggtatcgggggaagagatga

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