Trichophyton benhamiae: ARB_00228
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Entry
ARB_00228 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
abe
Trichophyton benhamiae
Pathway
abe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ARB_00228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abe03400
]
ARB_00228
DNA repair and recombination proteins [BR:
abe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ARB_00228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_23
AAA_21
Motif
Other DBs
NCBI-GeneID:
9519446
NCBI-ProteinID:
XP_003013410
UniProt:
D4AVL4
LinkDB
All DBs
AA seq
1217 aa
AA seq
DB search
MGSSAQTTPAPSRVLKRSTPSTQNMSKTQKSILGFFQPKSSPSAPSTSQRSSNLPASSPS
GASPLSETTTSSVRAKFSKQRLDDDQNITPVPSSDAIEPPEEDTPTAVRKTSAGNHEFST
SNTSSRRARTAVKSYEESEDEDVVQPGRRNARGRSQKRRRTGDLSSDEECFKPDEDDDED
KYIDDTDDFVVPDDESEEELKSSRKRKRPSKAPSKKESSSPPPIPGDDMDLEIPQCTSAS
TQKWRYDPDNVEPYQPRKALVKPETHSSSKQKKAHMTEPENRYPWLANIMDMDKNPLGHP
DYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDL
KLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQ
KEDKVIKRELACVLTTGTLVEGSMIQGDMSTYCVAIKEAIIDGLPAFGISFVDTATGQFF
LSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTKALRILKNNTGPTTLWNYLKPGKEFW
EADVTVRELDAGDYFVSEDKNHASAWPQALQDARDKDLVMSAFGALLQYLEMLKIGRDLI
TIGNFTWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQ
WVCHPLMDIKKINARLDAVESLNADSTVREQFSSQLTKMPDLERLISRVHAGTCKAQDFV
RVLEGFEQIEYTMGLLKEAGSGHGLIGQLISAMPDLNGLLKFWETAFDRAKARESDILVP
EEGIEEEFDASKKNIEQLEDELEQVLQRTRKELKCSTIVFKDNGKEIYQLEVPIKIKNIP
KSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQVVKGVAGRFYARFDKDYSSWLAAV
KIIAQLDCLIGLAKASTALGHPSCRPIFVDDERSVLDFQELRHPCMMPNVGDFIPNDVKL
GGDTSNINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDN
IFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGAL
GFFATHYHSLAAEFEGHPEIAARRMRIHVDDAERRVTFLYKLEDGVAEGSFGMHCASMCG
IPSKVVEGAEVAAKQWEHTSRMKESLEKRKGGGLIGLGWWSDVSWILKESAQAADEATRS
KNGDRGVEILLKAIEAL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgggatcatccgcccaaacgacgcctgctccgtctcgcgtcctcaagcggtcaacacca
agtacacagaacatgagcaagacccaaaaatccatcttgggattcttccagcctaaatcg
tctccttcggctccatcaacctcccagcgaagttccaatctaccagcatcttctccgtct
ggagccagtccactcagcgaaacaaccaccagctcggtgagagccaaattttcgaagcag
aggctagatgacgatcaaaatattactccagttccgagtagtgatgcaattgaacctccc
gaagaagacacaccgaccgctgtgaggaaaacatctgcagggaaccatgagttctctacc
tctaacacatccagcagacgggcgaggacggcggttaaaagttatgaagaatctgaggac
gaggatgttgtccagccagggagaagaaacgcacgggggcggtctcagaagcgaagaaga
actggggatctcagtagtgacgaagaatgctttaagcccgatgaggatgatgacgaagat
aaatacatagatgatactgatgacttcgttgtcccagacgatgaatcagaagaagaattg
aagtcatctaggaaacgaaagcgtccttccaaggcaccgtctaagaaagaatccagcagc
ccaccacctattcctggtgatgacatggacttggagatccctcagtgcacgtctgcttcc
acccaaaagtggcgctatgaccccgacaatgtagaaccataccagcctcgaaaagctcta
gtcaaaccagagacacactccagtagcaaacaaaaaaaggcccatatgacggagccagaa
aatcgatacccatggcttgctaatattatggatatggataaaaatccacttggtcatcct
gactatgatccccgtactttatacatcccacctctagcctggaccaaattttcgccattt
gaaaagcagtattgggagatcaaacagaaattctgggataccattgtgtttttcaaaaag
gggaaattttacgagctatacgaaaatgatgccactataggtcaccaactttttgatctc
aaacttacggatagagtcaatatgcgtatggtcggagttcctgaaatgagtcttgatcat
tgggccaaccaattcgttgcaaaaggattcaagattgctcgcgtggaccagtcagagtct
gcattaagcaaagaaatgagagaacgtgaagataaaggcaataagatgggaaaagcacag
aaagaagacaaggtcattaaacgagagctagcatgtgttctgaccactggaaccttggtg
gaagggtcaatgattcagggcgatatgtccacatactgcgtggcaatcaaagaggctatt
attgatggcttaccagcttttggtatatcgtttgtcgatacagctaccgggcagtttttc
ttatctcaattcgttgacgatgtggatatgacaaggttcgagacctttgttgcccagacc
agaccccaggaattgttacttgagaaatctgttatgtctaccaaagccctcagaatattg
aagaacaataccggcccaactactctctggaattatctgaagcccgggaaggaattctgg
gaggctgatgtcaccgttcgggagcttgacgcaggtgactatttcgtttcggaagacaaa
aatcatgcatccgcctggccgcaggcattgcaagacgctcgagataaagatttggtcatg
tctgcttttggggctcttttacagtatcttgaaatgctaaaaattggacgagacctcatc
accataggaaatttcacttggtacgatccaatcaagaaagcatccagtctcgtactggac
gggcagaccctaatcaaccttgaaatattcgcaaacacatacgatgggagctcggaagga
acactgtttcaactactcaaccgctgtgttacgccgtttgggaagcgactgtttaaacaa
tgggtttgccatcccctgatggatatcaagaagatcaatgcccggcttgacgctgttgag
tccctgaatgcagatagcacagtgcgtgagcaattctcgtcacagttgaccaaaatgccg
gaccttgaacggcttatatctcgagttcacgctggtacatgcaaagcccaagacttcgta
cgtgtacttgagggatttgaacaaatcgagtatacaatgggtcttctgaaggaagctggg
tctggtcatggattaatcggccaattgatctctgccatgccggatctcaacggtctcttg
aaattctgggagacggcatttgaccgcgctaaggctagagaaagtgatatcttagtccca
gaggaaggcattgaggaagagtttgacgcatccaaaaagaacattgaacaattggaggat
gaattagagcaggtactacaacggaccaggaaggagttaaaatgttcaaccattgttttc
aaggataatggcaaagaaatttaccaactcgaggttccgattaagatcaagaacatacca
aaatcttgggaccaaatgtccgccacgaagcaggttaagcgatattacttcccagagcta
agagcattgattcgaaaactacaggaagctcgcgagacacatgctcaggttgtgaagggt
gttgctggcagattttatgctcgatttgacaaagactactcgagctggcttgcagctgta
aagataattgcccagcttgattgtctgattggattagccaaagcttccactgcactagga
catccaagttgtcgtccgatatttgtcgatgatgagcgcagtgtacttgatttccaagaa
ctccgccacccctgcatgatgcccaatgttggagacttcattcctaatgatgtcaaactt
ggaggggatacatcaaatattaaccttctgactggcgcaaacgcagcaggaaagtctaca
gttttgagaatgacttgcacggcagttatcatggcacaaataggttgttatgtcccttgt
gaatatgcccgcctaactccggttgatcgtattatgtccaggcttggggctaatgacaac
atatttgctgctcaatccaccttctttgtcgagctttccgagaccaagaaaattctctct
gaagcaaccccccgttccctggtcatattggacgaactaggccgtggaactagctcttat
gacggtgttgccgtggcacaagcagtacttcaccatgttgctactcatataggcgctcta
ggtttctttgctactcattatcactcactcgcagctgaatttgaggggcaccctgaaatt
gctgctcgcaggatgcggattcatgtcgacgatgctgaaagacgtgtgactttcctctac
aaactagaagatggggtcgccgaaggcagttttggaatgcactgtgcctcaatgtgcggc
attccatccaaggtggttgaaggtgcagaagtcgctgcgaagcagtgggaacacacaagt
cggatgaaggagagtctagagaaacgaaaaggcggtggactgattggtctgggctggtgg
agtgatgtttcctggatcttaaaggagtctgcgcaggcagctgatgaggctactcggtca
aaaaatggtgaccgtggggttgagatactcctcaaggccattgaagcgttataa
DBGET
integrated database retrieval system
