KEGG   Trichophyton benhamiae: ARB_00312
Entry
ARB_00312         CDS       T01611                                 
Name
(RefSeq) transformer-SR ribonucleoprotein, putative
  KO
K12876  RNA-binding protein 8A
Organism
abe  Trichophyton benhamiae
Pathway
abe03013  Nucleocytoplasmic transport
abe03015  mRNA surveillance pathway
abe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ARB_00312
  09122 Translation
   03013 Nucleocytoplasmic transport
    ARB_00312
   03015 mRNA surveillance pathway
    ARB_00312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abe03019]
    ARB_00312
   03041 Spliceosome [BR:abe03041]
    ARB_00312
Messenger RNA biogenesis [BR:abe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     ARB_00312
Spliceosome [BR:abe03041]
 Complex C
  Other components
   EJC/TREX
    ARB_00312
SSDB
Motif
Pfam: RRM_1 RRM_5 PCF11_charged
Other DBs
NCBI-GeneID: 9519611
NCBI-ProteinID: XP_003013494
UniProt: D4AVU8
LinkDB
AA seq 160 aa
MSGEMEVDPPLSPEPQQTGSGPEPRTRASAAAVRSIEGWIIIATNIHEEASEEDVTDLFA
EYGDIKNFNLNLDRRTGYVKGYALIEYPTLPEAEAAIKALHGAKLLDQTIEVDFAFVRPP
PSSKGKSGGGQNSSRGRGGNRGRSRSRERSRSPEGNNDRS
NT seq 483 nt   +upstreamnt  +downstreamnt
atgtccggcgaaatggaagtcgaccctccgctctccccagagccacagcagaccggatct
gggccagagccacgtactcgcgcctcagctgcagcagtgcgcagcattgaagggtggatc
attattgcgacgaatatacatgaggaggcctcagaagaggatgttacagatctattcgct
gagtacggggatattaagaatttcaacctaaatcttgatcgaagaacgggttacgtgaag
ggctacgcgttaattgaatatcccaccctccccgaggcagaggcagctatcaaagccctg
catggcgcaaaattgcttgatcaaacaattgaagtcgactttgcattcgtacggcctcct
ccgtcttccaaggggaagtctggtggcggccagaactccagccgtgggcgtggtgggaat
agaggacgaagtcgaagccgtgaaagaagccgcagcccggagggcaataacgacagatct
tag

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