Trichophyton benhamiae: ARB_00374 Help Entry ARB_00374         CDS       T01611                                  Name (RefSeq) hypothetical protein   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism abe  Trichophyton benhamiae Brite KEGG Orthology (KO) [BR:abe00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:abe04131]     ARB_00374 Membrane trafficking [BR:abe04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     ARB_00374 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VPS13_VAB VPS13_N VPS13_M VPS13_C Motif Other DBs NCBI-GeneID:  9526779 NCBI-ProteinID:  XP_003013190 UniProt:  D4AW10 LinkDB All DBs AA seq 3143 aa AA seqDB search MLEGIVANLLNRFLGMYVKNFDAGQLNVGIWSGDVKLRDLELRREALDQLHLPLNVIEGH LGELTLSIPWSNLRGKPVKVHIQDVFLLAAPKEDSTYDPEEERKREHAVKMEKLESAELI KEQNTEGMSQEEQQKNQSFTQSLITAIVNNLQVAIKNVHFRYEDAIAAPGHPFAAGVTIK ELSAVSTDSNWKPTFIQSTSTSNYKLAVLNSLAVYWNTDAELFAPDHGASTESGEAGDTD APIFSHADLLEKFRDAVATGENNQYILKPVSGKAGLELDTSQNVDHPRAKAKLIFDELGF VLDDHQYRDVLMLVDLFHYFIQHREYRSLMPACRPKEDPRAWFRFAGQAILSKIHERNRK WTWGYIKERRDNRIRYIELFKMRKREDPMSPAETEEMKALEEKLSYEDLRFWRSLARNHL RKERIECPKKVVRQQTWSEWIWGTSPKEEDQPTSMTEEQRQELYQAIDWDEKKAIADAVD LPRDSVKFQVDSSLRAGSFTLKRDPHGKADEILKLVFENFQAKALQRPDSFLVQVDLGGL RLFDHTTDNTAFPQIVRVKDSYSMPSKNVEEITEMDIPESPDIETIDRENDDSLFYLQFE SNPLDGSADSALRMKLKSLEVIYTPKVLVEIVKFFRPPERHMESIGALLETAGATVAEIR QQTRAGLEFALEEHKTINAQLDIQAPLIIIPESITTGDSMCLIFDAGRVSVTSKLVDKET LKMVQSKQGTEIGDDDLSRLESLIPKTESKNLHIMDRINMDFVLELCIAPKSTLTRTRIS GHLPEFHASMSDTKYKNLMRLIDIAIPRFDTEESSTNSAEKVAQPETTSVETRARSQSIQ FPRQKDVPVLQSENDIAGPDDRKSAESKTPKNIHRRMFEFKFTVDTLRGSLYRSDPSDER KDRLLVELVAEHFQLDYNLREYDMAADIVLKSLSIEDYIEEHSSAPEFKKIVTSRGFDAN EEKDLFTLKFIRVNPSSPEFVSVYDGVEMNLDLVVSTINLIVTRKTLLTLLDFILITFTN QNPQDQVQNSHEQAASNDSKEAPKPANTGKIRISSKLERISLILNDDGIRLATLSLNTAD VGIFLANETMQIKSRMGSLTLFDDINENGKSSTVRRLMSIEGDDFADFRYQTFNPKLKDY PGYDSEVALRSGSIKINFIDEPYRRVINFLVKFGKMQSIFNAARQAAANQATQIQESSSL MHFDIMVKTPILVFPRITDRDGPRDFITAHLGEIYASNEFSQADHGEARYLVNTITAGIR HIRLTSTFYYSEDVCEELEMIEKVDMDFNIKYVQEPVDNSIPVMRVDGSMSPTNLRISQM QLKFLLELSQTIPAAFSPDQELQEGQAHQALPELSAGLSTAASSEKSNESKSLTDGSGKN AAEPKKSIQLELGFRVETIGLELLLVNEEAPVQSLDDVSLSKFFLSNTNVKLRMLNNGSL ESELLIHSFNVRDSRSKEINRFRKIMSLVNTEVQQQFMASLSMSGGTDRQLVVMVTIDSP RIIFAVDYLFSLKSFAAAAFPAEPDTDASESSDEESSGPVVSRENLQSKPATIPSSAMTA ENKSSLTMSFRFNMVDSQVILVANPTIANTEAIVLGAKQIVYSQQNASTLQITKVGMFLC RMDKFETSRLRILDDFSLELSMDTQSKSKSFSTTRIDMHVEPLILRLSPRDILLALQIMN RVSEMTSPTQPQNAASESKAIAAKPTQADLQSPSTPVQSRLTAADRIQQSSIVKKEEMSI QMDGIRVILIGDVHILPLLDWSVQSFRVDVRDWSANMSADTTFDTFINVYNFSKSTWEPL IEPWQLGFHMSKELSPDIFSIDAYSHKNMELTVTSATIALASKTMQFLSADEDVLSKPRG TDTPYRIRNYTGFELRVWADTGNGEEGHACTLEDGEEYPWRFEDPTTMRENLTPEGNAGT VGIKLEGSGFDSISRIPLIREGETLYNLKPKKDKVLHKLLVEVSLGTDYVKYITFRSPLV VENKTQIPVEVGVYSPEEGHLLKIEKILPGDSRPAPVGAAYLHSLVVRPDQGFGYNWSNE RLFWKDLLRRPTRTLKCQSENGQQSPPFYFQMNATFDKNDPLLSVYPYMRVRVSAPIEIQ NLLPYDFKYRIYDKNLKKDWTNFLRKGGVSPVHVVELSHVLLLSIDMQDTAFRQCEFAIV NGNVQEDFRRESTLTVQDDQGQELKLGLHYFTVPDSGGAFKVSVFSPYLVLNKTGLDLNI QSKGVFHGGRSAAGRAIKTDAMNGVRSAIPYMYSYPTDDRKNRSVLRVNGSSWSKPQSFE AIGSSFEVTLPGSNGRTEYHAGVTVEEGTGKYKVTKIVTVSPRFILENRLDEELVAREPG SSNVISLKPGELVPLHFLRQAAEKQLCFCFPGVNNQWSSLFNIADLGITYVKLAKANQRQ RLLKVEVLMEGATIFLRISMEAVHWPYSMKNESDAEFIFFQANPNVNEDEDDRSTTWRPI RYRLPPRSIMPYAWDYPAAKNKSLVLLCRGKERYIKLAEMGNLIPMKLPPTQDLPQKIID IRIEAEGPTQTLVLSNFRPSRSVYRQQKPASSQTSVSTGFEVKEINSDITFKAQLRLNGI GISLVNQNLRELVYITFREIDLKLSESKIYQTVNTTIKWIQVDNQLYGGIFPILLYPSVV PKTGREMEAHPIFTATVTRVKDDSYGVLYVKYASLLVQQMTLELDEDFIFALLDFVKVPG ASWSEEREDPICEAELGIPEPKHEAQGQDVYFEVLHLHPMQLDLSFVRTERVNVEDTTES SNPLMFFVNVMTMSIGNVNDAPVRLNALLLENARVSIPMLVSNITNHYTQEFLRQVHVVI GSADFLGNPVGLFNTVSSGVADIFYEPYQGFVMSDRPQELGLGIAKGATSFVKKSVFGIT DSLTKFTGSVSKGLAAATLDKEFQDQRRMSRARNRPKHALYGVTAGGSAFATSMASGIGG LARHPLEGAEKEGFQGFVKGVGKGFLGLATKPALGAFDLASNLSNFNADLAEGVRNTTTV FDAGGLDRVRLTRFIGRTGIVKPYSQREALGQFWLKTTDDGKYFNEEYIAHLEFPGKDML VLLTYDRIMLVRSKRLTTEWDIKLTDIQKISKERTGMTITLKGGTNGPFIPVQDESGRNW FYKQIAIGMFTYHHFSRQVEYIQ NT seq 9432 nt NT seq  +upstreamnt  +downstreamnt atgttagaagggatagttgcgaacctgttgaacaggttcctggggatgtatgtgaagaac ttcgatgcaggacagcttaatgtcggtatatggtccggtgatgtcaaactacgagacctg gaacttcgccgcgaggcacttgaccaactacatctaccgctgaacgttatcgaaggccat ctcggcgaactcacgctctctattccatggtctaatcttcgagggaagcccgtgaaagtg catattcaagatgtgttcctccttgcggcgccgaaggaggattccacttacgacccagaa gaagagaggaagagagagcatgcggttaagatggagaagcttgaaagtgctgagcttatc aaggagcagaataccgagggtatgagccaggaggagcaacagaagaaccagagctttacg cagagcttgataactgccatcgtcaacaatctccaggtggctatcaagaacgttcatttt cgttatgaagatgccattgctgctcctggacatccattcgccgcgggtgtcacgatcaag gaacttagtgctgtcagcacggattcaaattggaagcctacctttatacagtcgacgtct accagcaattataaacttgctgtcctgaactctctggcagtctactggaacacagatgca gagctctttgcgccagatcatggagcttctacagagtcaggagaagctggagatactgat gccccgatattcagccatgctgatttgctagagaaattccgagatgctgttgctacgggt gagaacaatcagtatattctcaagcctgtcagcggcaaagctggcctggaattagacacc tcccagaatgtcgatcatccgcgagccaaagctaaattgatattcgatgaactcggcttt gtgctcgacgaccatcaataccgtgatgttttgatgctagtcgacctcttccattacttc attcagcatcgagagtatcgaagcttgatgcccgcttgccggccaaaggaagacccccgt gcctggttcaggtttgctggtcaagccattctcagtaaaatccacgaacgaaaccgcaaa tggacttggggctatataaaagaacggagggataatcgtatccggtatatcgagttgttc aagatgagaaagagagaggaccccatgtcacctgcggagacggaggagatgaaagctctt gaagagaaattgtcgtacgaagatctgcggttttggcggtcccttgctagaaaccatctg agaaaagagaggattgagtgcccaaagaaggttgtcagacagcagacctggtccgagtgg atatggggaacgagtccaaaggaggaagaccagcccacgtccatgacggaagaacaacga caggaactgtatcaagctatagattgggatgagaagaaagctatagctgatgcggttgat cttccccgagactccgtcaagttccaggtagactcgagcctccgagctggcagcttcacc ttaaaacgagatcctcatggcaaggcggatgagatattaaagctggtctttgagaacttc caggcaaaggcactacagcggccggattcgttcttggtccaggttgatctcggtgggtta cggctgttcgatcataccacggacaatactgccttccctcagattgtccgtgttaaagat agctattccatgccaagcaagaatgttgaagagattaccgaaatggatatacctgaatcc cctgacattgaaacgatagaccgtgagaacgatgatagcctgttctatctccagtttgaa tcaaatcccctagatgggagcgcggattctgctcttcgcatgaaactcaaaagtcttgaa gttatatatacccccaaggtattagttgagatcgtcaagttcttccgccctccggaacga catatggaatccatcggcgctctcctggaaactgcgggggcaactgttgcggaaatacgt caacagacaagagctgggctggagtttgcccttgaagagcacaagaccattaacgcccag ctggacatccaggctccacttatcattatacctgagagcattactacaggtgacagcatg tgtctcatctttgatgccggtagagtgagcgtgaccagcaagctggtcgacaaggagact ctgaagatggttcagagcaagcaaggcactgaaatcggcgacgatgacctcagccgactt gaatccttgatacccaaaacggaatcaaagaacctgcatatcatggaccgtatcaatatg gactttgtgcttgagttatgcattgcccccaagtcaacactcaccaggacacggatatca ggccatcttccagaattccacgcctctatgtcggatacgaaatacaaaaatctcatgaga ctgattgacattgccatcccgagattcgacaccgaggagtcgtccacgaattcagcggag aaagtcgcacaaccagaaactacatcagttgaaaccagagccaggtcgcagtcgattcag ttccctcgacaaaaagacgtacctgttttgcagtcggaaaacgacatcgcaggccccgat gataggaaatcagcagaatcgaagactcctaaaaatatacatcggcgtatgtttgaattc aagtttaccgtggataccctgaggggctcattgtatcgatctgaccccagcgatgaaaga aaagatagactgctggttgaactggtggctgaacacttccaactcgactataatctcaga gaatatgacatggctgctgacattgttctgaaatctttgagtattgaagattatatcgaa gagcattcgtctgcccccgaattcaagaaaattgtcacatccaggggcttcgatgcaaat gaagagaaggacttgttcactctaaaatttatcagagttaatcccagctctcccgagttc gtttcagtgtatgatggcgttgaaatgaacctcgacctagtagtgtcgaccattaatttg attgttactcggaagacattgcttaccctattggatttcattttaattactttcaccaac cagaatccacaggaccaggttcaaaactctcatgaacaagccgcctccaatgactcaaag gaagctccgaagccagctaatacagggaaaattcgaataagctcaaagttagagaggatt tcccttatcttgaatgacgatggcattcgtctagccaccctcagtctgaatactgcggat gttggaatattccttgccaatgaaacgatgcagatcaaatcaagaatgggcagtctgacc ttattcgatgatatcaatgaaaacggcaagtcgtcaacagtccgtcggcttatgagtatt gaaggggatgatttcgcggatttccgctaccaaactttcaacccgaaacttaaagactat cctggttacgattcagaggtagctttacgatctggttcgatcaaaataaacttcatcgac gagccgtaccgaagggttattaatttcctagttaagtttgggaagatgcaaagtatattc aacgcagcccgtcaggctgcagccaaccaagctacacaaatccaagaaagctcatcactg atgcattttgatatcatggtcaagacacccatcctggtgtttccccgaataaccgaccga gacggacctcgagatttcatcaccgctcatttgggagagatatatgctagcaacgagttt tctcaagctgaccatggagaagcaaggtacctggttaacaccatcaccgctggaatccgt catatccgcctcacgtctaccttctactactcggaagatgtctgtgaagaattggagatg attgagaaagtggatatggatttcaatatcaaatatgttcaagaacccgttgacaattcc atacccgttatgcgtgttgatggctctatgtcacccaccaatcttcggatttcgcaaatg cagcttaaattcctcctcgagctatcccaaaccatcccggctgcgttttcacctgaccaa gaacttcaagaaggacaagcccatcaggccctacccgaactatctgcggggttaagtaca gccgctagttcagaaaaatccaacgagtccaagtcactcacggatggatctggtaaaaat gccgcagagcctaaaaagtcaattcaactcgaattaggattccgcgtggaaactattggg ttagaactgctccttgtgaacgaggaggcgccggttcagtctctcgatgatgttagcttg tctaagttcttcttgagcaataccaatgtgaagctccggatgttgaacaatggctccctc gagtctgaactgcttatccactcctttaatgtacgagacagcagatcaaaggagataaac cggttccgtaagattatgtccctggtcaataccgaagttcagcaacagtttatggccagt ctttccatgtccggtggtaccgatcgccaattagtggtgatggtaacaatcgatagcccg cgtattatattcgctgtcgattatctgttctctctcaaatcatttgcagcagcggcattc cctgctgagccagatacagatgcttcagaaagctcggatgaagagtcctcgggcccggtt gtgtcgcgtgagaacctgcaatctaaaccagcgactattccttcaagcgctatgacagca gaaaacaaatcttcccttacaatgtccttcagattcaacatggttgattctcaagtcatc ctggtcgctaacccaacgattgcgaacacagaagctatcgtcctgggggctaaacaaatt gtctattcccagcagaatgcgtcaactcttcaaatcaccaaggtcggcatgttcctttgc cgtatggataaatttgagaccagtagactgcgtattctggacgacttttcgctagaatta tccatggatactcagagtaagagcaaaagtttctctacaaccaggattgacatgcatgtg gagccattgattcttcggttgtcaccacgagatatcctccttgctctgcagataatgaac agagtatctgagatgacttcaccgacacagcctcagaatgcagcaagcgagtcgaaagct attgctgctaaacccacacaggcagacctacagtcaccaagtacccccgttcaatctcga ttgactgcagcagatagaattcaacagtcatccatagtgaagaaggaagaaatgtccatt caaatggatggtattagagttatactgattggtgatgtacacatacttcccttgcttgac tggagtgtgcagtcattccgagtcgatgtcagagactggtctgccaatatgagtgctgat accactttcgacaccttcatcaacgtttacaatttctcgaagtctacttgggagccgttg attgagccctggcagcttggattccatatgtcgaaagaactaagccctgacatattctct attgatgcatattcccataagaacatggagttaacagtcacatctgcaacgattgctttg gcgtctaaaacaatgcaattcttgtctgcggatgaggacgttctttcaaagcccagaggt acagatactccttatcgaatccgaaactatacaggctttgaattgcgagtatgggcagac actggcaatggagaggaagggcatgcctgtaccctggaagatggcgaagaatacccctgg aggtttgaagacccaactactatgcgagagaaccttactccggagggcaacgctggtacg gtaggaattaagcttgagggcagtggattcgatagcatcagccgcatccccctcatccgt gagggggaaacactttataatctgaagccaaagaaagataaagtgctacataagctgttg gtggaagtcagcttggggacagattacgtcaagtatatcaccttcagatccccccttgtg gtggagaataagacacaaatacccgttgaggttggggtatatagccccgaagagggacat cttcttaagattgaaaaaatacttccaggtgattcacgtccagcaccagtgggtgccgca tacctacattctctcgttgtgcgcccagatcagggcttcgggtacaattggtcaaacgag aggctcttctggaaagatttgctgagacgaccgaccagaaccctcaaatgtcagagtgag aatggacaacaatctccaccattctacttccagatgaatgccacttttgacaagaatgat cctcttctgtccgtatatccgtacatgcgggttcgtgtctctgctcctattgagatccaa aacttacttccatatgactttaagtaccgcatatatgacaaaaacttgaagaaagattgg acgaacttccttagaaaaggaggggtgagtccggtccatgtcgtggagctttctcatgta ctcctcctaagtattgacatgcaggatacagcattcaggcaatgcgagtttgcaatagtc aatgggaatgtccaagaggatttcaggagagagtctacccttactgtccaagatgatcaa ggccaagaactgaaactaggccttcactactttaccgttcccgatagtggtggtgccttt aaggtctctgtgttcagtccctatcttgttctgaacaaaaccggactcgatctcaacata caaagcaaaggcgtcttccacggaggcaggtctgcagcgggtcgggctataaaaacagat gcaatgaatggagtccgttctgccattccttatatgtattcttatccaacagacgaccgt aagaaccggtcagtcttgagggttaatggctcttcgtggagcaagccccagagcttcgaa gccataggaagcagtttcgaggttactttaccaggttccaatggccgaaccgagtatcac gcaggcgtgacggtagaagaggggactggtaaatacaaagtcactaaaatagtcacagta tcccccagattcatactcgagaacaggctggatgaagaattggttgctcgtgagccaggt tcttccaatgttatctctctaaagcctggtgaacttgtgccgctgcatttcctgaggcaa gcagctgaaaaacagctttgcttctgcttccctggtgttaacaatcagtggtcctccttg ttcaacattgctgacctaggaataacttatgtgaaactagcaaaggcaaaccagcgccag agattactcaaagttgaagtgcttatggaaggtgctacaatattcttacgcattagtatg gaggcagtacactggccgtattctatgaagaatgaatcggatgcagaattcatattcttc caagcgaacccaaacgttaacgaggacgaagatgatcgcagcactacctggcggcctatc cgttaccgtcttccgccccgcagtatcatgccctacgcatgggattatcctgccgctaaa aacaagtctcttgttctgctatgtcgaggaaaggaaagatatatcaaactcgctgaaatg ggcaacttgataccaatgaagctcccgccaacccaggatttgccccaaaagattattgat atccgcattgaagcagaaggtcctacgcaaactcttgtcttatccaatttccgaccatca agaagtgtatataggcagcaaaagcctgcctcttctcaaaccagtgtgtccactggattt gaagtcaaggaaatcaactcggacattacgttcaaagcacaacttcgattaaacggtatc gggatatccttagtcaaccagaacttgagggagctcgtgtatatcacgttccgcgagata gatctcaagctcagcgaatctaagatctaccagacggtcaataccactatcaagtggata caagttgataatcaattatatggcggaatattcccaattcttctatacccaagcgttgtc ccgaaaactggtagggagatggaggcgcatccaattttcacagctacggttacccgggtt aaagacgactcatatggagtcttgtatgtgaagtatgcttcacttcttgttcagcagatg actcttgaactcgatgaagacttcatttttgccctccttgactttgtgaaggttccaggc gcctcttggtccgaggaacgtgaggaccccatttgtgaggctgaacttggcattccagaa ccaaaacatgaagcacagggacaggacgtgtatttcgaggtccttcacttgcatcctatg cagcttgatctgtccttcgttcgtacagaacgagtcaatgttgaggatacgacagagtcg tctaacccattgatgttcttcgtcaacgtcatgacgatgtcaataggtaacgttaatgat gctccggttagattaaacgcactgcttctggagaacgcaagagtgtctataccgatgctt gtttcgaatatcacaaaccactatactcaggaattccttcgtcaggtccacgttgttatt ggctctgcggatttcctaggtaatcccgttggtttgtttaacaccgtgagttccggagtt gccgatatattctatgagccatatcaagggtttgtcatgtccgacagacctcaggagctg ggcctcggaattgccaagggtgccacttcattcgtcaagaagtcagtgtttggaattacg gacagtcttacaaagttcacgggaagtgtctccaaaggtctcgctgccgcaacactggat aaagagtttcaggatcaacgaaggatgtctagagcccgaaatagaccaaagcatgctctt tacggagtgactgcaggaggcagtgcttttgctaccagcatggcaagtggaattggtggt cttgcgcgtcatccactggagggtgctgaaaaagaaggattccaaggatttgttaaaggt gtcggaaagggattcctaggacttgcaacaaagccagcactcggtgcttttgatctagct tccaacttatctaactttaacgcagatcttgctgaaggagtaagaaatacgactacagtt ttcgatgccgggggccttgaccgagttcgtttaactcgctttattggtcgaactggaatt gtcaaaccgtattctcagcgagaagcgctgggccaattctggctcaaaacgacagacgat ggcaaatacttcaacgaggagtatattgctcatctagagttccctggcaaagatatgctt gtgttattgacgtatgatcgaatcatgcttgtccgatcaaagcgtctcacaacagaatgg gacatcaaattgaccgatattcaaaagatatcaaaggagagaacaggaatgaccataacg ctaaagggcggcaccaacggaccattcataccggtacaggatgagagtggaagaaactgg ttctacaaacaaattgctattggtatgtttacttatcatcatttctcccggcaagttgag tatattcagtaa

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