Trichophyton benhamiae: ARB_00378
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Entry
ARB_00378 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
abe
Trichophyton benhamiae
Pathway
abe03022
Basal transcription factors
abe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ARB_00378
09124 Replication and repair
03420 Nucleotide excision repair
ARB_00378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abe03021
]
ARB_00378
03400 DNA repair and recombination proteins [BR:
abe03400
]
ARB_00378
Transcription machinery [BR:
abe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ARB_00378
DNA repair and recombination proteins [BR:
abe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ARB_00378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
9526780
NCBI-ProteinID:
XP_003013194
UniProt:
D4AW14
LinkDB
All DBs
AA seq
625 aa
AA seq
DB search
MAPTSPSASASYKKKDGTLAISSDLQSITWTPKNGSDSLLSLQTASVTNLQQTPVNNPKV
MLKIFVQGPPPGQGQSQESAAPVPYVFTFTSPSNARAEADAIKEALNTIIQNTKLAQTPA
RDGTPTAPAAAKPPWYDDNRLKADMALQQSLLNSNEGLKRVFAESLRAKPASVTHGQLVS
QFWSSRIHLLRAHAIEKSQEQGAYNVLSTVKPRVEDKRRLNLSKEQIQLIFSQHPLVKKV
YDENVPKVAEEIFWSQFFQSRLFKKLRGERITDADPTDSLLDKYLKYDENTGQPANEFER
VPHLINLEGNEENVSQRQGNRPSFDMRPTPVDKVPIIRTLNSLSEKIMRNVAPADQHLTN
AENADREVYNELQLRDLREQEEQKRIMLNIRDQSRFFSEGNAGEIKKEQIVAKQDPTASL
DMLRSDFSRTYIDTPQVKLSRLVEPEDGDSSDEEQSKPKKEPVGSKASLASAKSQIFGII
GQRKAQADPESSSSTCGLSQTIFDRLALTHATTTEFLTQFWNAFLSGNPDRASEIASMVE
SLNRAMDRINEVAKAAEAERQVELDKLKKHAREVMASTGRRIRLAEVDGGEKVVKQLMGP
TINALSKATAEYQKALAQQTAEGQS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgacttctcccagcgcatctgcgtcttacaagaagaaggatggaacgctggcg
atatcgagcgatcttcagtctataacgtggactcctaaaaatgggtcagatagcttgttg
tcgttgcaaacagcgtccgtcaccaacttacagcagactcccgttaataacccgaaggtt
atgctgaaaatatttgtccaaggaccaccgccaggtcaaggccagagccaggaaagcgca
gctccggttccatacgtttttacatttacctcgccctctaatgctcgcgccgaggctgat
gcgatcaaggaagctctgaatactatcattcaaaatacaaagttagcccagacgccggca
cgcgatggcacacccacggcgcctgcagctgcgaaaccgccatggtacgacgataatcgc
ctcaaagccgacatggctctgcagcagtctctgttgaattctaacgaaggtctaaagcgt
gtctttgcggagtctctgcgagcaaagccggcttcagttacacacgggcagcttgtatct
cagttttggtcttctcgaatacacctgctgcgggcccatgctatagaaaaatctcaggaa
caaggagcctataacgtattgtcaactgtcaagccgcgagttgaggataagcgaaggctt
aatttgagcaaggaacagatccagctgattttcagccagcatccgttagttaaaaaagtt
tacgatgagaacgttcctaaggtggcagaggagatattctggtctcaatttttccagagt
cgccttttcaagaaattgagaggcgagcggataacggacgctgacccgacggactcctta
cttgataaatacctgaagtatgatgagaatacgggacagcctgctaacgaattcgaacgg
gtgccccatcttatcaatctagaaggaaatgaagaaaatgtctctcaaagacaaggtaat
cgaccttcctttgatatgagaccaacaccggtagacaaggttcctataatcaggactttg
aactccctcagtgaaaagattatgaggaatgtggctccagccgaccagcatctgaccaac
gctgaaaatgcggacagagaagtctataacgagttgcaattgcgagatcttcgggagcaa
gaggaacagaagcgtatcatgttgaatattcgcgatcaaagccgcttcttttctgaagga
aatgctggtgaaatcaagaaagagcaaattgtagcgaaacaagatccaacagccagcttg
gatatgttgcggtcagacttcagtcggacatacatagatacgccgcaagttaagctaagt
cgccttgtcgagcctgaggatggggatagcagtgatgaagagcaatcaaagcccaagaaa
gaaccggttggttcaaaggcaagtctagcaagtgccaaatcccagatctttggaataatc
gggcaacgaaaggctcaggcagacccggagtcctcttcgagtacttgtggcctttcacaa
acaatctttgatcgcctagctctgacgcatgccaccacaactgagtttctaactcaattt
tggaatgcgtttctgtcgggaaaccctgatcgagcttctgagattgcatcaatggtggaa
tcacttaacagagccatggatcgaataaacgaggttgcaaaggcagccgaagcagaacgg
caggtcgaacttgacaagctcaagaaacatgcgagagaggtaatggcttctacgggtagg
aggattcgtctcgccgaggttgatggcggcgaaaaggttgtcaagcagcttatgggccca
actattaatgcgttatcaaaggccacagccgagtatcaaaaagcccttgcgcagcagacg
gcagagggacagtcttga
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integrated database retrieval system
