KEGG   Trichophyton benhamiae: ARB_00436
Entry
ARB_00436         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
abe  Trichophyton benhamiae
Pathway
abe03013  Nucleocytoplasmic transport
abe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ARB_00436
  09122 Translation
   03013 Nucleocytoplasmic transport
    ARB_00436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abe03019]
    ARB_00436
   03041 Spliceosome [BR:abe03041]
    ARB_00436
Messenger RNA biogenesis [BR:abe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     ARB_00436
Spliceosome [BR:abe03041]
 Complex C
  Other components
   EJC/TREX
    ARB_00436
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    ARB_00436
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Cytochrom_D1 eIF2A NBCH_WD40 DPPIV_N PALB2_WD40
Other DBs
NCBI-GeneID: 9519205
NCBI-ProteinID: XP_003013251
UniProt: D4AW71
LinkDB
AA seq 331 aa
MPPASSNLVSKDRIRTLAWNPTGTLIATGSVDRTLRIWNPERPDVRYSTDLRGHTSGIEQ
IAFNPVKESELASCSKDGTVRFWDVRAKNCVGRVDVGGEAFSLAWSPDGSVLLAGRMDDT
LVPISVEPVAMSTNPAPNAPKAPSTYKALSHHKQPIRTNGIAFSHSFDPNLFLTTGDGTV
KIESYPSFDTLHTLNAHTAACLCVSLAPTARYLAIGGGDSLISLWDTTNWVCQRTVSSSG
GGAVRGISWSWDGRFIVGACDETDCGGTGLEIFHAETGDSVYTIPTGNPNVGVPAVAWHP
SRYCLAYSLYAEGIGSGNNGLRIVGAGAGDF
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccgccagcttcttctaatctagtatccaaggatcgcattcgtactttggcatggaac
ccaacgggaacgttgatagcaactgggtctgttgatcgaacactgcgcatctggaacccg
gaacgacctgacgtgagatattcgaccgatttgcgcggacacacttccggcattgaacag
atagcattcaaccccgtgaaggaatctgagctcgccagctgctcgaaggatggaactgtc
cgcttttgggacgtgcgcgcaaagaactgcgtcggccgtgtcgatgttggaggggaggcc
ttttccctcgcatggtcccccgatggaagcgtactgctggccgggagaatggatgacaca
ttagttcctatatctgtcgaaccagtagccatgtctaccaatcctgcacccaatgcgcca
aaagcgccatcaacctacaaagcattgtctcaccataaacaacccatccgtacgaatggg
attgcattttcacactctttcgatccaaaccttttcctcaccaccggggatgggactgtc
aaaatcgaatcttacccatccttcgacacactacatacgctcaatgcccatacagccgct
tgtctttgtgtctcgcttgctccaactgcgaggtatctagccattggcggaggagattca
ctcatttccctctgggatacaacgaattgggtatgccagcgcactgtctcgagtagtggt
ggtggagccgttcgcggtattagctggagttgggacggacggtttatagtgggcgcctgt
gacgaaacagactgcggcggcacaggtttggaaatattccatgctgagaccggagatagt
gtgtacactataccgacgggcaatcccaacgttggggtccctgccgtagcctggcatcca
tcccgttattgtcttgcgtattctctctacgcagaaggtattgggagtggcaataacggc
ctacgcattgtaggtgccggtgccggtgacttttga

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