Trichophyton benhamiae: ARB_00436
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Entry
ARB_00436 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12880
THO complex subunit 3
Organism
abe
Trichophyton benhamiae
Pathway
abe03013
Nucleocytoplasmic transport
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_00436
09122 Translation
03013 Nucleocytoplasmic transport
ARB_00436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_00436
03041 Spliceosome [BR:
abe03041
]
ARB_00436
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
ARB_00436
Spliceosome [BR:
abe03041
]
Complex C
Other components
EJC/TREX
ARB_00436
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
ARB_00436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Cytochrom_D1
eIF2A
NBCH_WD40
DPPIV_N
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
9519205
NCBI-ProteinID:
XP_003013251
UniProt:
D4AW71
LinkDB
All DBs
AA seq
331 aa
AA seq
DB search
MPPASSNLVSKDRIRTLAWNPTGTLIATGSVDRTLRIWNPERPDVRYSTDLRGHTSGIEQ
IAFNPVKESELASCSKDGTVRFWDVRAKNCVGRVDVGGEAFSLAWSPDGSVLLAGRMDDT
LVPISVEPVAMSTNPAPNAPKAPSTYKALSHHKQPIRTNGIAFSHSFDPNLFLTTGDGTV
KIESYPSFDTLHTLNAHTAACLCVSLAPTARYLAIGGGDSLISLWDTTNWVCQRTVSSSG
GGAVRGISWSWDGRFIVGACDETDCGGTGLEIFHAETGDSVYTIPTGNPNVGVPAVAWHP
SRYCLAYSLYAEGIGSGNNGLRIVGAGAGDF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgccagcttcttctaatctagtatccaaggatcgcattcgtactttggcatggaac
ccaacgggaacgttgatagcaactgggtctgttgatcgaacactgcgcatctggaacccg
gaacgacctgacgtgagatattcgaccgatttgcgcggacacacttccggcattgaacag
atagcattcaaccccgtgaaggaatctgagctcgccagctgctcgaaggatggaactgtc
cgcttttgggacgtgcgcgcaaagaactgcgtcggccgtgtcgatgttggaggggaggcc
ttttccctcgcatggtcccccgatggaagcgtactgctggccgggagaatggatgacaca
ttagttcctatatctgtcgaaccagtagccatgtctaccaatcctgcacccaatgcgcca
aaagcgccatcaacctacaaagcattgtctcaccataaacaacccatccgtacgaatggg
attgcattttcacactctttcgatccaaaccttttcctcaccaccggggatgggactgtc
aaaatcgaatcttacccatccttcgacacactacatacgctcaatgcccatacagccgct
tgtctttgtgtctcgcttgctccaactgcgaggtatctagccattggcggaggagattca
ctcatttccctctgggatacaacgaattgggtatgccagcgcactgtctcgagtagtggt
ggtggagccgttcgcggtattagctggagttgggacggacggtttatagtgggcgcctgt
gacgaaacagactgcggcggcacaggtttggaaatattccatgctgagaccggagatagt
gtgtacactataccgacgggcaatcccaacgttggggtccctgccgtagcctggcatcca
tcccgttattgtcttgcgtattctctctacgcagaaggtattgggagtggcaataacggc
ctacgcattgtaggtgccggtgccggtgacttttga
DBGET
integrated database retrieval system