KEGG   Trichophyton benhamiae: ARB_00500
Entry
ARB_00500         CDS       T01611                                 
Name
(RefSeq) replication factor C subunit
  KO
K10755  replication factor C subunit 2/4
Organism
abe  Trichophyton benhamiae
Pathway
abe03030  DNA replication
abe03410  Base excision repair
abe03420  Nucleotide excision repair
abe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ARB_00500
   03410 Base excision repair
    ARB_00500
   03420 Nucleotide excision repair
    ARB_00500
   03430 Mismatch repair
    ARB_00500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abe03032]
    ARB_00500
   03036 Chromosome and associated proteins [BR:abe03036]
    ARB_00500
   03400 DNA repair and recombination proteins [BR:abe03400]
    ARB_00500
DNA replication proteins [BR:abe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    ARB_00500
  DNA Replication Termination Factors
   ELG1-RFC complex
    ARB_00500
Chromosome and associated proteins [BR:abe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    ARB_00500
DNA repair and recombination proteins [BR:abe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     ARB_00500
  Check point factors
   HRAD17(Rad24)-RFC complex
    ARB_00500
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_24 SLFN-g3_helicase UBA_HYPK AAA_19 AAA_11
Other DBs
NCBI-GeneID: 9519269
NCBI-ProteinID: XP_003013315
UniProt: D4AWD5
LinkDB
AA seq 326 aa
MLFYGSPGTGKTSTILAMSKSLFGPALVRSRVLELNASDERGINIVREKIKDFARMHLFQ
PPADPAYRSQYPCPPFKIIILDEADSMTHDAQSALRRTMEKYSRITRFCLVCNYVTRIID
PVASRCSKFRFKVLDGSAAQSRLVEIARMEKLDLEDNVVETLLRCSDGDLRKAITFMQSS
ARLARYGSGKKKDSSDKDMELDDVKPRITVRSIEEVSGLVPETVMQRVVAALRPSKRASK
YEEISSLVADLVADGWSASQVLSQNVLLTSFKTYQAVLQDESISDVQKNQILKVCSEFDK
RLVDGADEHLSTLDFMLQISGIIQST
NT seq 981 nt   +upstreamnt  +downstreamnt
atgcttttctatggatctccaggtactggaaagacgtcaaccattcttgcgatgtccaaa
tctctttttggacctgctctcgtccgctcccgagtccttgagcttaacgcttctgacgag
cgaggtataaacattgttcgtgaaaagattaaagattttgctcgaatgcacctattccaa
cccccggccgatcctgcctatcgctcacaatatccgtgtccaccgttcaaaatcatcatt
cttgatgaagcagatagcatgacccatgacgcccagtccgctctccgcagaactatggag
aaatacagccggattactcgtttctgcctcgtttgcaattatgtcactcgaataattgac
cccgtggcgagtaggtgcagcaaatttcgattcaaggtactagacggttctgctgcccaa
agccggcttgtagagattgcaagaatggagaaactagacctggaggataatgttgttgag
accctacttcgatgcagtgatggtgacctgcgaaaggctataacatttatgcagagctct
gcaaggctagcccgctatggctctgggaaaaagaaggattcgtctgataaagacatggag
ctcgatgatgtcaaacccaggattactgtcaggagcattgaagaagtatctggcctagtt
ccagaaactgttatgcaacgtgttgtcgcagctcttcgcccaagcaagcgtgcttcgaaa
tacgaagaaatctcaagcctcgtagctgacctcgtggccgacggatggagtgcctctcaa
gtcctgtcacagaatgttctactgacctcattcaagacataccaagcagtacttcaagac
gaatccatttcagatgtacagaagaaccaaatattgaaggtctgctctgaatttgataaa
cgactagtagatggcgcagatgagcacctttcaactctggatttcatgctacaaatatcc
ggcataatacaatctacttag

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