Trichophyton benhamiae: ARB_00527
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Entry
ARB_00527 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
abe
Trichophyton benhamiae
Pathway
abe03013
Nucleocytoplasmic transport
abe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ARB_00527
03015 mRNA surveillance pathway
ARB_00527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_00527
03041 Spliceosome [BR:
abe03041
]
ARB_00527
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
ARB_00527
Spliceosome [BR:
abe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
ARB_00527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
DUF8142
DUF7337
Motif
Other DBs
NCBI-GeneID:
9519377
NCBI-ProteinID:
XP_003013342
UniProt:
D4AWG2
LinkDB
All DBs
AA seq
579 aa
AA seq
DB search
MEQWPFDKKGITMEKADSSSPEIRAKKIFACGFSQKQGGCFDLSMFCSFDSRNFGSMADL
VSLEWDIENSRSFVSPPLTWNRWNWVDGSNPFPWRIPKSAKRQQKDNHRDKQQRRRDRSE
KELQRRRQRAAIMDAKLLKTTKFPPEFAKKVDMTKVNIEVMKKWIAERISDILGNEDDVV
IELCFNLLEGSRFVRGQTDSRLLVSLLRVEFDGLTINLTGFLEKDTAKFCKDLWNLCLSA
QDSPQGVPKELLEAKKLELMQEQRESGGERERIVAVAEEAAVALLVELIGTTAEILPRLI
DGDEAHRFTEIHLAGEQISTFPAVVEAIDEMIIEGAARRDSPLLRRPGHHHALSRQFGTV
DGIGGLPKEGGGVRPAALAHLIEVTVTVTVTVAGNEPAARPMMTTPGPQAARRPEEDGED
REAEALSLHPLLVIGLRDPVVHLHHDLRRGQVARVIGEVGALGGDPLCTNKGLDVMYLEL
ILLKIAEVTTTAGLAAAVAAVAAAVAIEREAGVEAAEDTAEDSGRPAAGHRRAAHVAAAA
AAAAVAGGGINLLKDMPQLDAGRARTVLPLHHLLKSDRE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatggccatttgataagaagggaatcaccatggagaaagcagatagcagttct
ccggagatacgagcaaagaagatctttgcctgtggattcagccagaagcaaggcggatgt
ttcgatctgtcgatgttttgcagttttgatagtcgtaactttggttccatggcggatcta
gttagcctggaatgggatatcgaaaactctcggtcgtttgtttctccgcctctcacatgg
aatcgatggaactgggtggatggatccaatccatttccatggcggatcccgaagagcgcc
aaaaggcagcaaaaagataaccacagagacaagcagcagcggcgaagagacagaagcgaa
aaggagttgcagagacggcggcagcgagccgcgatcatggacgccaaactgctgaagacg
accaaatttccgccggagtttgcgaaaaaggtggacatgaccaaagtcaacatcgaggtc
atgaagaaatggattgcagagcggatatctgatatcctggggaacgaggacgacgtcgtt
atcgagctctgcttcaacctcctcgagggctcgcgatttgtacgtggacagacagattct
cgtttgctagtttccctcctccgggttgagtttgatgggctaactatcaatcttaccggt
ttcctggagaaagatacagcgaaattctgcaaggatctatggaacctctgcctcagcgcg
caggatagcccccaaggtgtccccaaagagttgctggaggcgaagaagctggagttgatg
caggaacagagagaatccggcggagagagagagaggatcgtggccgtggcagaagaggcc
gcggtggccctgctcgtggagctgatcggtacgacagcagagattctccctcgcctcatc
gacggagacgaagcccaccggtttaccgagatacacctcgccggggagcagatatctacg
ttcccagcggtggtagaagctatagacgagatgatcatagagggcgccgcccgtcgagac
agccctctacttcgccgtcccggtcaccatcacgctctgtctcgccagttcgggaccgtc
gacgggataggaggtctcccgaaagaaggcggcggcgttcgaccagcagctctcgctcac
cttatagaggtgaccgtgaccgtgaccgtgaccgtggctggaaacgagcccgcagcccga
cccatgatgacgactccaggtccccaagccgctcgccgtccagaagaagacggagaagat
cgagaagcggaagctctatctctccaccccctgctagtaatcgggcttcgagatcccgtc
gtgcatcttcatcacgatctccgtcgaggtcaagtagcgagggtgatcggagaagtcggc
gccctcggaggagatcccctttgtaccaacaagggtctagacgtgatgtacctagagctg
atattgctaaagatcgcagaagtcacgaccaccgccggcttagccgcagccgtagccgca
gtcgcagccgcagtcgccatcgaacgcgaagccggagtcgaagccgcggaagataccgcc
gaagacagcggtcgaccagcagcaggtcatcgacgagcagctcacgtagccgcagccgca
gccgcagccgcagtggccggcggaggcatcaatctattgaaagatatgccccagctggac
gcaggtcgcgcaagaacagttctgccccttcaccacctgctcaaaagcgacagagaatag
DBGET
integrated database retrieval system
