Trichophyton benhamiae: ARB_00623
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Entry
ARB_00623 CDS
T01611
Name
(RefSeq) small nuclear ribonucleoprotein Lsm8, putative
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
abe
Trichophyton benhamiae
Pathway
abe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARB_00623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_00623
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ARB_00623
mRNA degradation factors
5'-3' decay
Lsm complex
ARB_00623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Ribosomal_L2_C
Motif
Other DBs
NCBI-GeneID:
9523158
NCBI-ProteinID:
XP_003013078
UniProt:
D4AWQ7
LinkDB
All DBs
AA seq
221 aa
AA seq
DB search
MENFPTLEQAARGRQGDPMRHPHGGGHHGPSPPSNPQQQQPQQLQQPQIPPASAIPLLEP
QGPPQLPPQLFTTAAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAE
NLYADIPRGVFLVRGENVLLLGEIVRQCPCKDTSLQPLIMSPMQDLDKDDDIPEPYRQAP
ASEVLKLKKQAEERRKRKDKRRSTHLQALGFEPEHSGEILF
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttcccgacactagaacaggccgcgcgagggcggcaaggtgatcctatgcgc
catccccacggcggaggacatcacggacccagcccgccgagcaacccgcagcagcaacaa
ccgcagcagctgcagcagcctcagatccccccggcttccgctattccgcttcttgagccc
cagggccctcctcagctgcctccccagctctttacgactgcggcacagctactagacttg
acagacaagaagttggtgttggttctgcgtgatggccgcaagttaattggagtattgcga
agctgggaccaattcgccaacattgtactgcaggacactattgaacgactatacgccgag
aatctgtatgctgacatccctcgtggagtgtttctggtcagaggagagaacgtattgctt
cttggagagattgtacgtcaatgtccctgcaaagataccagcctccaaccactaattatg
tctccaatgcaggacctcgataaagatgatgacatcccagagccttaccgacaagcacct
gcgtccgaagtcctcaagctaaagaagcaggccgaggagcggcggaaacgcaaggacaag
aggcgaagcacgcatttgcaagccctcgggtttgagcctgagcacagcggagagattctc
ttctga
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