Trichophyton benhamiae: ARB_00663
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Entry
ARB_00663 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
abe
Trichophyton benhamiae
Pathway
abe04138
Autophagy - yeast
abe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
ARB_00663
04148 Efferocytosis
ARB_00663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
abe04131
]
ARB_00663
Membrane trafficking [BR:
abe04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
ARB_00663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
SCD
Motif
Other DBs
NCBI-GeneID:
9523198
NCBI-ProteinID:
XP_003013118
UniProt:
D4AWU7
LinkDB
All DBs
AA seq
1044 aa
AA seq
DB search
MLTAFTARPLVEFRPRDKSKIESILTYGDRLLVGLNTGSLRIYRVNEVNVDEAEIRAGDD
TEAQEGSGDGGGVIQPSPATKPTDLLRELEKFSRYKIEQLAIIKEANILLSLSNGHVSIH
DLQSYELHEQLTRTKGATTFAVTSNIEKDQDTGVPSIVSRLAVAVKRKLMLWTWQDMELE
DDATEITLVSGIKTITWANGTKLLAGLSSSYVLVDVVTREVTDIVGPGSIGGAGGSDTGR
LGGVGASMSYIGMGGATPKPLATRLCEGQMLLAKDVNSHFIDTDGNGLKRRQIPWTVAPE
AVGYSYPYLLALQDASKGILEVRNPETLSLLQSVSLPSAAMIHIPQPNISLAHAGKGFLV
ASGRVIWRMSALDYDSQIDGLVEQGNLDEAISLLGMLEDALLNDKEGRLREIKLRKAQTL
FEKQKYRKSLDLFTEVSAPPEIVIRLFPKLIAGELSSIEEEPAQESLESSEENPSQPENG
TSIHSAEPTTPDDKPKVKNGTYAPSVTSFLRGRPDDASETGSMRGKPADLKEPDKRLEGK
DLKAAVYELQGFLADIRRRLSRFISPDGTLKEPSVNVDKSDETTQSMLKTLGISSDDLEN
IDMSQKLRETATLVDTTLFRALMFATPTLAGSLFRIDNFCDPEVVMEKLEQTARYGDLID
FLFGKRLHRSALEQLKKFGQKEAGEEISPELQGPKRTVAYLQNLPPDMIDLILEFAEWPL
RSDPELGMEIFLTDTENAETLPRQKVLEFLNGIDAKLAIKYSEHVINELNDLTPDIHFRL
LTLYLERILKSKKSKDVFPTEDEREECKNRFLKMLETSEQYSPAKMLDRLPRDDPEFFEP
RAVTLSKMGQHRQALEIYVFKLDNPAKAEEHEHKLTGPVQRYCNRIHLGDSTSTKQRAVP
YGSSPAVEDEEARPSIYHTLLSLYLSPPHGYEPRYGPAIEILARHGSRLPASSTLSLIPG
SLPIHDLEFYFRSRIRAANSILNQGRIISSLHKIQSAEIEAALRLGDNVGSNKGRNRCIT
VSEDRVCSHCHKRLGGSVISVFPK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgcattcacggcgaggcccctcgtggagttccgacctcgcgacaagtcgaag
atagagtccatcttgacgtacggggacaggctgctggtcgggctgaacacaggatcgctg
cgaatatacagggttaatgaagtgaacgtcgacgaagcagagatacgggctggcgatgac
acagaggcgcaggagggcagtggtgacggcggtggtgtcattcagccatctccagcaacc
aaaccgacagatctactgcgagagctagagaagttctcgcggtataagatcgagcagttg
gcgattatcaaggaggcgaatattctcctttccctttcgaacggccatgtctcgatacac
gatctgcagtcctacgagctgcatgaacagttaactcgaactaaaggggctaccaccttc
gcggttacctccaacatcgagaaggatcaggacactggggttccgtcgattgtgtctagg
cttgctgttgcggtgaagaggaagctcatgttatggacatggcaagacatggagcttgaa
gatgatgctacggagataacacttgttagcgggataaagaccattacttgggcgaacggt
accaagctactagccggacttagctcaagttatgtccttgttgatgttgtgacaagagaa
gttacggatattgtaggacctggaagcattggaggggctggcggatctgatacggggcgt
ctgggaggagtaggtgccagtatgagctacataggcatgggcggagcaactcccaaaccg
ctcgctacaagattgtgcgaaggacagatgctactggcaaaggatgtcaactcacatttt
attgacacggatgggaacggcctcaaacgacgtcagattccttggacggtggctcctgaa
gctgttggctactcatacccttacctactagcacttcaggatgcatccaaaggcatactt
gaagtgcgcaatccagagactctatcacttcttcaatcggtatccctcccatcagctgcc
atgatccatatcccacagccaaatatcagtcttgcccatgcaggaaaggggtttctcgtg
gctagtggacgtgtgatctggagaatgagtgctctcgactatgactcgcagattgatggt
ttagtagaacaaggtaatctcgacgaagccatcagtcttcttggaatgcttgaagatgcc
cttctgaatgacaaagagggtagactgcgagagatcaagcttcgcaaggcccagactcta
ttcgaaaagcagaaataccggaagtcgttggacctttttacagaagtttcagctcctccc
gagatagttatacggttattccctaaactcattgctggagagctatcatctattgaggaa
gaacctgcacaggaaagtttggagagctcagaggagaatccctctcagcctgaaaatggt
accagcattcacagtgctgaacccactacacccgatgacaagccgaaagttaagaatggg
acttatgcaccatctgtaacctcgtttctaagaggaagaccagatgatgctagcgaaact
ggtagcatgcgtggtaaaccagcagacctgaaagaaccagacaagcggcttgaagggaaa
gatttgaaagcagctgtctacgagctgcaggggttcctagctgatattcgccgaagactc
tctagatttatcagtcccgatggcacacttaaagagccctcagtcaacgtggataaatca
gacgaaaccacccaatctatgttgaagaccttgggtatctcttctgatgatctagaaaac
atcgacatgagccagaagttgcgggagacagctacattggtagataccaccctattcaga
gcccttatgttcgcaacccctacgctagctggctcgctcttccgcatcgataatttctgt
gaccctgaggtggtgatggagaagctagaacagaccgctcgctacggcgacttgatagac
tttttatttggcaagcgccttcatcgctctgccttggaacagcttaagaagtttggccaa
aaagaggccggagaggaaatctcgccggaactccaaggccccaaacgcacagttgcctat
ctgcagaatttaccacccgacatgatcgatttgattctggagtttgctgaatggccactt
cgaagtgatcctgagctcggcatggagatcttccttacggatacagaaaatgcagagacg
ctgcctcgtcagaaggttcttgaattccttaatggaatcgatgcaaagctcgccattaaa
tattcagaacatgttatcaacgagctaaatgacctaacaccagatatacatttccggctg
ttaacgctataccttgagcggatcctcaagagtaagaaatcaaaggatgtttttccaacc
gaggatgagcgagaggagtgcaagaaccgattcttgaaaatgctagaaacgagcgaacaa
tattctcctgccaaaatgcttgatcggctcccaagagatgatccggaattctttgagcca
agggctgttacgttgagtaagatgggacaacaccgtcaagctcttgagatatatgtgttt
aagctggacaatccggcaaaagcagaagaacatgagcataagctgactggtcctgtgcaa
aggtactgcaatcgaatccatttgggtgattccacatctaccaagcaacgtgcagttcca
tatggtagttctccagcagttgaggatgaggaggcccgcccgtctatctaccatacactt
ctttctctgtacctgtcaccgccacatggttatgaaccacgatatggccccgcaatcgag
atccttgcacgacatggttcccggttacctgccagctccactctcagccttatcccaggc
tcattgccaatccacgacctcgaattctacttccgcagccgtatccgtgcagccaacagc
atcttaaaccagggtcgaattatatcctcgctgcataagattcaaagtgcagaaatagag
gcagcactgcgtttgggtgacaatgttggcagcaacaaaggaagaaaccgctgcatcacc
gtcagcgaagatcgggtgtgcagccattgtcataaacggttaggtgggagcgttatcagt
gtgtttccaaagtaa
DBGET
integrated database retrieval system