KEGG   Trichophyton benhamiae: ARB_01809
Entry
ARB_01809         CDS       T01611                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNP-associated protein Lsm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
abe  Trichophyton benhamiae
Pathway
abe03018  RNA degradation
abe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ARB_01809 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ARB_01809 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abe03019]
    ARB_01809 (lsm7)
   03041 Spliceosome [BR:abe03041]
    ARB_01809 (lsm7)
Messenger RNA biogenesis [BR:abe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     ARB_01809 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     ARB_01809 (lsm7)
Spliceosome [BR:abe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    ARB_01809 (lsm7)
SSDB
Motif
Pfam: LSM MCM_bind
Other DBs
NCBI-GeneID: 9526498
NCBI-ProteinID: XP_003011830
UniProt: D4B038
LinkDB
AA seq 223 aa
SKKDKKRTRTASLNSGHNDLARGGYLLLHLYSWTVHTQADTPPTHTNIFTQFTKRRKQYT
KIKKKKTINNTQNYHGQHRGGHGQGQRDGQRDGGQQRDGQGQQQQEKPKKENILDLTKYM
DKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRGKTVHLDFKEVDGLNMFADWLGV
DDNDNVTTRSLGLIVARGTLLVLLSPADGSEEIANPFVQQEDE
NT seq 672 nt   +upstreamnt  +downstreamnt
agcaaaaaagacaagaagagaacaagaacagccagcctcaactcaggccataacgacctt
gctcgaggaggatacctactcttacatctttactcctggactgtccatacacaagctgat
accccccccacacataccaacatattcacacaattcacaaaaagaagaaaacaatatacc
aagataaaaaaaaaaaaaacaataaataatacccaaaattatcatggccagcaccgggga
ggccatggccaaggtcagcgggacggacagagagacgggggccagcagcgagacggacag
ggccagcagcagcaggagaagcccaagaaggagaacatcctggacctgaccaagtacatg
gacaaggaagtcaacgtcaagttcaacggcggcagagaggttaccggcgtgttgaagggg
tatgatcagctcatgaacctcgtgctggacgatgtcaaggagaccatgcggggtaagaca
gtacatttagattttaaagaagtagatggtttgaatatgtttgctgactggctgggggta
gatgataatgacaatgtaacgactcgctcgctggggctgatcgtggcgagggggacgctg
ttggtgctgctctcgccggcggacgggagcgaggagattgccaaccctttcgtgcagcag
gaagacgaataa

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