Trichophyton benhamiae: ARB_01970
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Entry
ARB_01970 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARB_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
abe03000
]
ARB_01970
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_01970
04121 Ubiquitin system [BR:
abe04121
]
ARB_01970
Enzymes [BR:
abe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
ARB_01970
Transcription factors [BR:
abe03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
ARB_01970
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ARB_01970
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
ARB_01970
Ubiquitin system [BR:
abe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
ARB_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Rubredoxin_2
Motif
Other DBs
NCBI-GeneID:
9523514
NCBI-ProteinID:
XP_003011742
UniProt:
D4B0J5
LinkDB
All DBs
AA seq
843 aa
AA seq
DB search
MTKLAPPPKKEEDEEDEEDAKTLRRKLILHSLLVFRSASHLDVDVFLLPPSFLSPWCLSV
SHGSSHNMSSRALNDSVIDDDDELCPLCIEEFDLSDKNFKPCPCGYQTHSEEGRCPNCRR
VYDESSIQYRVPDVDEFKADLALKHRKAAAAKRKEAEKREIEASSRKNLAGVRVVQKNLV
YVIGLNPTIRDENLLLQTLRGDQYFGQYGDIDKIVVSKAKPGGNPNQGIGVYVTFARKID
AATCIAAVDGSPNGDRVLRRQDLSSMNSISSQRYPSNGSSSAISQAPNQTTQRPSPAISH
ARAVNAPNTQWPAVKDDGGVRSSSTDSSALPSSASWANRDSLAQRTRRESIAASRSSPSP
KPTNEQLASRPVNGYGKDSQRTAEQLNTTSDSAGPSEQSNTARRPESPSPTMIFDKLVKA
VNSPEFRFHFSTEAVPDNELVFIENHPSLIDPYGGVKRRAMREKAEQERAKHALDGKLLQ
APAEEENLESGSSQLGGEPEDVHGGVGVPGRHQREPQSAIQPPSQQATANNSVVGSPVPN
SHQFQNINVNARNLSQLQQQQLMLLKSAGGQQHNIMDLQANTASGTFDQNVRTFQNQMAG
LNNIPGHTRQSSRFSFAYDVNSKNPSGRLVGSQGPMMQSSSPNPLSIPTTQHNLGNQYFV
SGIQGPPPGLKSAGTPPVSGGGMFAQGHGFTSTMNSNLGLGTKQDGNADLMREIIRARGT
AGGNVQSHDATKREFLFPLLQQNSTPPPLAPVSGLLNPLYGQQLGLYQDQVPQKQKKRGK
KHRHANTSSGGGGVVDLADPSILQARMHQGGANAAAGQGLYGSQGQGGYNHSNMVYSGGF
GRW
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgactaagctggcgcctccgccgaaaaaggaagaagacgaagaagacgaagaagacgcc
aagacgctgcgcagaaagctcatcttgcactccctcctcgtttttcgcagcgcatcccat
ctcgacgtcgacgtcttccttctcccgccatctttcctctctccttggtgtctctccgtt
tctcacggcagctctcacaacatgtcttcaagagccctaaacgactcagtcattgatgac
gatgacgagctctgcccgctctgtattgaagagtttgatctctctgataaaaacttcaag
ccatgcccgtgtggctaccagacccatagtgaagaaggccgttgcccaaattgcagacgc
gtttatgacgaaagcagcattcaataccgtgtcccagatgttgatgagttcaaagcagac
ttggctctaaaacatcgaaaagccgctgcagccaaacgaaaggaggctgaaaaacgagaa
atcgaagcctcaagtaggaaaaacttggctggtgtccgggtggttcagaagaacctcgtc
tatgttatcgggcttaatcctacaatccgggacgaaaatttactcttacaaacgctccgg
ggtgaccaatattttggccagtatggcgatattgacaaaatagttgtcagcaaggcgaag
ccgggtggcaacccaaaccaaggtatcggtgtctacgtgacctttgcgaggaagatagat
gcggctacatgtattgcggcagttgatggctcacctaacggtgacagagtcttacgtcga
caagacctttcatccatgaattcaatttcttcgcaaagatacccatcgaacggatcgtcc
tccgcaatctcacaagctccaaaccaaaccacccagcgtccatcccctgcgattagccat
gctagggccgttaatgctccaaatacccagtggcccgctgtcaaggacgacggcggagtg
cgttcttcgagtacggattcatctgctcttccatcgtctgcaagttgggcgaatagagat
tccttggctcagagaactaggagggagagtatagcggcgagtcgatcatctcctagccct
aagccgacgaacgaacaattggcttctcgacccgtaaacggctatggaaaagattctcaa
cgaacagcggaacaactgaacactacctcggactcggctggtcccagtgaacagtcgaat
acagcacgccgaccagaatctccgtctcccaccatgattttcgataagctagtaaaagct
gtcaattcaccggagttccgatttcacttctcaactgaagctgtcccagacaacgagttg
gtatttatcgagaaccatccgtctctaatagacccgtacgggggcgtcaaacgccgggcc
atgcgtgagaaagctgagcaagaacgagcaaaacatgccctcgatgggaaacttctacaa
gccccagccgaagaagagaaccttgaaagcgggagttcacagctaggtggtgaaccagag
gatgtccatggtggtgttggtgttcccgggcgacatcaaagagaaccacaatctgctatt
cagcctccttctcaacaggcaacggccaacaactcggttgtggggtccccggttccaaac
agccatcagttccagaacatcaatgtcaatgcccgaaatctttcccagcttcaacagcag
caactcatgctactcaagtctgctgggggccagcagcataatattatggatctccaagcc
aataccgcgtctggcacctttgatcaaaatgtccgaaccttccagaaccagatggctgga
ttgaataatatacccggtcatacaaggcagtcttcgcggttttcatttgcctatgatgtt
aattccaaaaaccccagtggcagacttgttggttctcagggtcctatgatgcaatcatcc
agccccaatcctctttcaatccctactacacaacacaatcttggcaatcaatactttgtt
agcggtattcaaggcccgccaccaggattgaagagtgctggtactcctccagttagtggt
ggcggcatgtttgcccagggccatggtttcaccagcacgatgaacagtaaccttgggctc
ggtaccaaacaagatggaaatgctgatttgatgcgtgaaattattcgtgccaggggcact
gcaggcgggaatgttcagtcccatgatgcaacaaagcgtgagttcctgtttcctttactc
caacaaaatagcacaccccctcctctggctcccgtttcaggccttttgaacccgctctat
ggccagcagcttggtctatatcaagatcaagtgccacagaagcagaaaaagaggggaaag
aagcatagacatgctaacacttcctccggcggaggcggtgtagtagatcttgcagacccg
agtattttgcaggcgaggatgcaccaaggtggcgccaatgctgccgctgggcaggggctg
tacgggagtcagggtcaaggtgggtacaaccattccaatatggtgtacagtggagggttt
ggaaggtggtaa
DBGET
integrated database retrieval system
