Trichophyton benhamiae: ARB_02008
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Entry
ARB_02008 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
abe
Trichophyton benhamiae
Pathway
abe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARB_02008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_02008
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ARB_02008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
DUF608
Motif
Other DBs
NCBI-GeneID:
9523552
NCBI-ProteinID:
XP_003011779
UniProt:
D4B0N2
LinkDB
All DBs
AA seq
333 aa
AA seq
DB search
MGDTAAVCGVRAEILHTDDIASWKVASELSSRSAKRRKTEDAGAKSEPGPVIDNEDDDSD
IQSFNLLVPNLSLSTGCSPSIFASAPPTALAQSLSHQLLSLLHSSNLIRAEDLRIWYTPD
PAKASETTNEDIEMDDGNDNSTQTTAKDPEVKAFWTLYIDVLMVSLAGNPFDVAWAAIVA
ALKNTKLPKAWWDLESERVLCSNRVSEAKALRLRGMPISSSFCVFEAHGMDDWRRVFLPF
DQQKGKGKKLDGSVSNDADEAYDKWILADPDAFEESLCPERICVVVDLTSSNSVAKIVRL
EKNGGFYVGKEEIKDIVSLATSRWNELKMVLEG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacagcagctgtttgtggcgtgagggcagaaatactccataccgatgatatt
gcctcctggaaggtcgcatcggagctgtcttcgagaagcgctaaacggaggaaaactgaa
gatgctggtgcgaaatctgaaccgggcccggttatagataatgaagatgacgattcggat
atccagtcattcaatttacttgttcccaacttgtcattaagcaccggttgttcacccagc
atatttgccagtgctccacctacagctctggcgcagtctctatcccatcaacttctttct
cttcttcacagctcgaatctgattcgtgctgaagatctacggatatggtataccccagat
ccagccaaggcatccgagaccaccaatgaggatatcgagatggatgatgggaatgataat
tcgacccaaacaacagccaaggacccagaagttaaagctttttggactctatatattgat
gtcttgatggtttcacttgcaggaaacccgtttgatgtagcgtgggcagcaatagtggct
gcactaaaaaacaccaaactgcccaaggcatggtgggatttagagagcgagagagtacta
tgctctaatagagtttctgaagccaaagccttacgactacgtggtatgccgatttcgagc
tcattctgcgtttttgaggctcatggaatggacgattggaggcgggtatttcttccgttt
gaccaacaaaaggggaaagggaagaaattggacggctcggtttctaatgatgcggatgaa
gcttatgataaatggatattagcggatcctgatgcgtttgaagagtctttatgcccagaa
cgtatctgtgttgttgtggatctcacctcgtcaaactccgtcgctaaaatagtgcgtctg
gagaaaaatggtggattttatgtgggcaaagaagaaataaaagatatcgtcagcttagcc
acctcgaggtggaatgaattaaagatggtgttagaaggctga
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