Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12586 | exosome complex component RRP43 |
|
Organism |
abe Trichophyton benhamiae
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:abe00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARB_02008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:abe03019]
ARB_02008
Messenger RNA biogenesis [BR:abe03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ARB_02008
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
AA seq |
333 aa
MGDTAAVCGVRAEILHTDDIASWKVASELSSRSAKRRKTEDAGAKSEPGPVIDNEDDDSD
IQSFNLLVPNLSLSTGCSPSIFASAPPTALAQSLSHQLLSLLHSSNLIRAEDLRIWYTPD
PAKASETTNEDIEMDDGNDNSTQTTAKDPEVKAFWTLYIDVLMVSLAGNPFDVAWAAIVA
ALKNTKLPKAWWDLESERVLCSNRVSEAKALRLRGMPISSSFCVFEAHGMDDWRRVFLPF
DQQKGKGKKLDGSVSNDADEAYDKWILADPDAFEESLCPERICVVVDLTSSNSVAKIVRL
EKNGGFYVGKEEIKDIVSLATSRWNELKMVLEG |
NT seq |
1002 nt +upstreamnt +downstreamnt
atgggcgacacagcagctgtttgtggcgtgagggcagaaatactccataccgatgatatt
gcctcctggaaggtcgcatcggagctgtcttcgagaagcgctaaacggaggaaaactgaa
gatgctggtgcgaaatctgaaccgggcccggttatagataatgaagatgacgattcggat
atccagtcattcaatttacttgttcccaacttgtcattaagcaccggttgttcacccagc
atatttgccagtgctccacctacagctctggcgcagtctctatcccatcaacttctttct
cttcttcacagctcgaatctgattcgtgctgaagatctacggatatggtataccccagat
ccagccaaggcatccgagaccaccaatgaggatatcgagatggatgatgggaatgataat
tcgacccaaacaacagccaaggacccagaagttaaagctttttggactctatatattgat
gtcttgatggtttcacttgcaggaaacccgtttgatgtagcgtgggcagcaatagtggct
gcactaaaaaacaccaaactgcccaaggcatggtgggatttagagagcgagagagtacta
tgctctaatagagtttctgaagccaaagccttacgactacgtggtatgccgatttcgagc
tcattctgcgtttttgaggctcatggaatggacgattggaggcgggtatttcttccgttt
gaccaacaaaaggggaaagggaagaaattggacggctcggtttctaatgatgcggatgaa
gcttatgataaatggatattagcggatcctgatgcgtttgaagagtctttatgcccagaa
cgtatctgtgttgttgtggatctcacctcgtcaaactccgtcgctaaaatagtgcgtctg
gagaaaaatggtggattttatgtgggcaaagaagaaataaaagatatcgtcagcttagcc
acctcgaggtggaatgaattaaagatggtgttagaaggctga |