Trichophyton benhamiae: ARB_02022 Help Entry ARB_02022         CDS       T01611                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism abe  Trichophyton benhamiae Brite KEGG Orthology (KO) [BR:abe00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:abe03021]     ARB_02022 Enzymes [BR:abe01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      ARB_02022     5.6.2.5  RNA 5'-3' helicase      ARB_02022 Transcription machinery [BR:abe03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      ARB_02022 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_19 AAA_30 Viral_helicase1 DEAD zf-CCHC ResIII CEP104-like_TOG nSTAND3 zf-CCHC_5 Motif Other DBs NCBI-GeneID:  9523566 NCBI-ProteinID:  XP_003011793 UniProt:  D4B0P6 LinkDB All DBs AA seq 2117 aa AA seqDB search MYWLTFDLLFRIRELKSLPEELHLLCPRKNDNDMEQYNKYTESENKSSEAGAQTNPDILE RISEAAVRREKFLSCIQLLAFSGEEVEAQQQWIWRRLKETLERCDICIKEYYRGKIWLIE TLGESYDESEVEKFSKMLDDWDIARVGKNLDKAASMLASISPGQRKISALDRASMLSIFE ALSSTPVLGNETFLCEHFDQPFTMVQSSRALKITEYVPAATQFLFDKNKHRNDWAVFTWS KLARPPTTTEFDCAIKEPLLAALRRASTPPFDPDFVDSLWRGVTIIIKGLNKDQITHNLR GLELDPCRLSVDHLAIQAPALRSVINTIHALLKKSPNDFWDAMQTISPQAIIEQIFYNPQ YEVFLTATDNNDSLTESPLRDMLSWIDPFITSLKNTHQPQACRFLVHQLLNRLQEPRFPT IVKYHCFRSGLMVLYRTLRSFTDNEDSRGSVATIVLSEMMEVISDNIKHFLNPPRFEVDG SESEISVLCMDVVRNTLALECQSLKSDYETILRDNTLQHGVSTYTAPIWDAVVQHLDEKN LALSSAALRGILPLVGLEKFQTRGENTKEKTHFNVIYGHLTHLACQILERLSDFRPEHLD ELFKAQETNGSLTSALFSADLNTYQAAVDLIKAVSGQLGRKEAISHLLQSFCASTMFGFS WSFRRISNMKTFASAPRMLKTGTDIIEVLCDSQTGILRTRKLNDPKEVYFLQRLWEYQWL ALSTIFSHTEKWHRMGVDRSIMLEFCRDSIQFAELLFDQFPIFATAVGEADPAQANSAKS NLLRYPTTTMNAMVKWLRLKDEYLATTLVGIVSKVLRRLGDLNATVQEEALDVIKDVALT AKIKTILTDSEKAELVRSMEAYYKKPLITPIPAPTPKKKQSSITAFAKPVDPNTIVKSES KPIKEEGHESEIDIPDDVLIELSGSIDLHKARIASQKKPIPRPIAPYKPLPPVAPLAKPA HNVLSFREKREREKEAKKKRDMIELAKVKKNLPLRGMSEQTASQGSGLSGLNIGVVEHKP ADSMMVSSDSDSDSDSDDNGDEDMVGKRVSSKPDAVRAYEESRKKLLQRVPVKKAKIIRS AKDMRARLAPDLSSLHKTLLSWDFFSTTVLPPNCGRTDYTLVSNVFANALEYQKTFEPLL ILEAWQGFQTAREDATFKEFEIKVANRLSVDSFVEVSTIMEPQQVKDLGLGEADLVLLSR SNKPATDSSAPHCLGRISGIKKKKGTVEVSYRINPSGPMASGIGSGGGLFGVKITSLTPL EREYGALMALQYYDLSEEIIRAKPSPILNYGPESLKTILATYDLNPAQAKAIKSAVDNDA FTLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPKIASDSAQASKSTPSKKLLVCAPS NAAVDELVMRFKEGVKTLNGKTQPISVIRLGRSDAINANVLDVTLDELVNAKLNQSDQKK NGEERDLQSYFNEHKETSAKFIEIRQRIDQCRARAEPVSNELEREFDLLKRKKAQLSQAI DNARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIEFETVIIDEAA QSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLL DTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDVQGMHSSAAK GHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSSIFT AVEFNTTDAFQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLV RGEFWRALIYDARERQLYTEGDILRILQKPQISLDMELNNVEMVDAPAEVGNIPTPSSRP GSSMAGSSNSRPPSRLSNPQSTAESLPSELPSGSAVGTPVPCLPDGPSGGKSGLNDLAMC GYCGSHQHMTHNCDNIDAKIACQGTCRRCGDETHSIRDCKAERCVQCGETGHLANDCKST TVLPKWEKNKIIKEEAHHKSMQQARIERQKQKAIAAHDPKIPLIQVPGKKPSAENTAPPH NSGPGKRKRSDPQASSDPKVMRLDQSTASSTPPKDSKGKKQDGSTSAAAQTPAVNLPKGP RGRKADPHSVAPPPSVC NT seq 6354 nt NT seq  +upstreamnt  +downstreamnt atgtattggctaacgtttgacctcttatttcggattagggagctgaagagcctgcctgaa gagcttcaccttctgtgccctcgtaaaaatgacaatgatatggagcagtacaacaaatac accgagagcgaaaataaatctagtgaagccggtgctcagacgaaccctgatatacttgag agaatatcagaggctgcggtccgtcgagagaaattcctctcctgcatacagctactggct tttagtggcgaagaggttgaagcacagcagcaatggatatggaggcgcctcaaggagaca ttagaaagatgtgatatttgcatcaaggagtactacagagggaaaatatggctgattgag actttgggtgaaagctacgatgaatctgaagtggaaaaattcagtaaaatgctggatgat tgggatatagcccgagtcgggaaaaatttggataaagctgccagtatgctcgcaagtatc tcccctgggcagcgtaagataagcgcccttgatcgagcctctatgctctccatttttgag gcgttaagctctaccccggtgctagggaacgagacgttcctttgtgagcattttgaccaa ccgtttacgatggtacaaagctcgcgcgctctaaagatcacagaatatgtacctgccgcc acgcagtttcttttcgacaaaaacaagcatagaaacgattgggctgtgtttacttggtca aagctagccagaccaccgacaactacggaattcgactgtgcaatcaaggagcctttactt gcggctttacgccgggcatccactcctccatttgatcctgactttgttgattcgctatgg cgtggagtcactatcataattaagggactgaacaaggaccaaatcacccacaaccttcga ggacttgaacttgatccctgccgattatctgttgaccacctagccattcaagctccagct ttacgttcagttatcaacacgatacatgctctcttgaagaaatctccaaacgacttttgg gatgccatgcaaactatttcaccacaagccattattgagcagattttttacaatccccag tatgaagtgtttttaacggctactgataataatgactccttgactgaatctcccctgagg gacatgttgtcatggatagacccctttatcacgtccctcaagaatacccatcagccgcaa gcatgtcggttcctagttcaccagcttctcaaccgccttcaggagcctcgatttcctacc attgtcaagtaccattgctttcgaagtggtcttatggttctttatcgtaccttgcgtagc ttcacggataatgaagactcgagaggttctgtggctaccatcgttctatccgaaatgatg gaagttataagtgataatatcaagcatttccttaaccctccacggttcgaagttgatggg agtgagtcggagatttctgttctctgtatggatgtggtccgaaacacactggcactggaa tgccagtctctaaaatcagactatgaaaccatcctcagggataatactctacaacatggc gttagcacatatacagcgcctatatgggatgctgtagtccaacatcttgatgaaaagaat ttagccctctcttctgcagccctgagaggtatcttgcctctcgtaggacttgagaaattc cagacgaggggagaaaacacgaaagaaaagacgcattttaatgtcatttacggccacctt actcatctcgcatgccagatccttgagagattgtctgatttcagacctgaacatctggac gaattattcaaagctcaagagaccaatggttctttgacctctgcattattctctgccgac ttaaatacgtatcaggccgctgtcgatctgataaaagccgtcagtggccaactggggcgc aaggaagcaatttctcacttattacagtcgttctgtgcctccacgatgtttgggttcagc tggtcttttcggcgtatttccaacatgaaaacattcgcctctgctcctagaatgcttaaa actggcacggatatcatcgaggtcctctgtgattcgcaaactggaatactgaggactcga aaacttaatgatccaaaagaagtatacttcttgcagaggctttgggagtaccagtggttg gcactttctacaatattcagtcataccgaaaaatggcatagaatgggcgttgacaggtca atcatgctggaattctgtcgagacagtatccagtttgctgagcttctgttcgaccaattt ccaatatttgccacggccgttggagaagccgacccagcacaagctaactcggcaaagagt aatctccttcgatacccaactaccacaatgaatgccatggtaaaatggttacggctaaag gatgagtaccttgcgactacactggttgggatcgtttcaaaagtgcttcgccgtcttggg gatctaaatgcaacagttcaggaggaggccttggacgtcatcaaagatgttgctctgact gccaaaatcaagactatcttgacggatagtgaaaaggcagaactagtaaggtctatggag gcctattataagaaacccctgatcactcctattcctgctccaactcccaaaaagaaacaa agttcgattactgcttttgctaaacccgtggatcccaacacgattgttaaatccgaatct aaaccgattaaagaggagggacatgagagtgagattgacattccagatgatgttttaata gaactatcaggttcaattgatcttcacaaggctagaatagcctctcagaagaaacctatt ccccgccctatcgcaccttataaaccacttccacccgtggcaccattagcaaaaccggct cacaatgtcctttcattccgtgaaaagcgcgagagggaaaaggaggccaagaagaaacgt gatatgatagagctcgccaaagtaaagaagaacttgcctttacgtggcatgagtgagcag acagcatcacaaggctccggccttagcggccttaatataggagtcgttgagcataaacct gcggacagtatgatggtgtcttccgactcggattcagactcagacagtgacgataatgga gacgaagatatggttgggaagcgggtatcttcaaaaccagatgctgtgagagcttatgaa gaaagtcgaaagaaactcctacaacgagtgcccgttaagaaggcaaagatcatccgctct gccaaggacatgcgagcgcggcttgccccagacttatcgtctctccataagacattatta agttgggatttcttttcaacgaccgttcttcctcccaactgtggccgaactgactacaca ttggtttccaacgttttcgcaaatgcactggaatatcaaaagactttcgagccattactg atactagaagcctggcaaggcttccaaactgctagagaggatgcaacatttaaagaattc gaaatcaaagttgcaaaccgtctttcagttgactcatttgtggaagttagcacaattatg gagcctcaacaggtcaaagacctagggctaggggaagctgatttagttctgctatcccgc tcaaacaagcctgccactgattcgagtgcacctcattgtctcggtaggatatccggaatc aagaagaagaaagggacagtagaggtatcctatcgcattaatcccagtggcccaatggct agcggaattggatctggaggtgggctgtttggtgtaaagatcacctctcttacacccctt gaacgcgaatatggagcactcatggctctccaatattatgacctgagtgaggagattata agagcaaagccatctccaatactgaactatggcccagagagcttgaaaaccatactggcc acatatgacctcaatccggcgcaagccaaggctattaaatcggctgtggataacgatgcg ttcacgctaatccaaggacctcctggttcaggcaaaaccaaaaccatagttgcgattgtt ggagcgcttctaacacccatcctggcggaacgaaaggttccacaaccaaaaatagccagc gactcagcacaggcgagcaagtcaaccccatcaaagaaactgctagtttgcgcgcctagc aatgcagctgtcgacgagctagtgatgaggtttaaggaaggggtgaagacactcaacggt aaaacacagccaatctctgtcattcggttaggtcgaagcgatgcgatcaatgccaatgtg ctggacgttacgctagacgagcttgtcaatgccaagttgaaccagagtgatcaaaagaaa aatggagaagagcgtgatttacagagctatttcaacgagcacaaggaaacctctgccaaa ttcattgagatacggcagagaattgatcaatgcagggcgagagcagagcccgtctctaac gagctcgaacgagaattcgatcttctaaaacgaaagaaggctcaactaagtcaggccatt gataatgctagagacaagaaccatgccgcagcacgaaatgctgagttgactcgacgacga atacaacaagaaatcattgacggagcccatgttatctgctccacccttagcggcagtgga catgaaatgttccaaagtctaagtatcgaatttgagacagttatcatcgacgaggctgcc cagtctattgaattgagcgctctcattcctctcaaatatggctgctccaagtgtgttcta gttggagatcccaaacagctacctccaacagtgttatcgaaggaagcatctcgattccaa tatgaacaaagtttgttcgttcgaatgcaagcaaaccatccaaatgatgtccatcttctc gacactcaataccgaatgcatccagagataagcaaattcccaagccaagcgttctatgat gggaagctacaagatggacctggaatggcgccattacggaaaaagccatggcacggaagt gagcttcttgggccatatcggtttttcgatgtccagggcatgcactccagtgctgccaag ggccattctttggttaacattgcagaacttacagtagcaatgcgcctctacgaacggctc ctggctgactatagaaattatgattttgcggggaagattggcataatcacgccttacaaa ggccagctgagggagctcaagagtcggtttgctgctaaatatggcagttcaatattcacc gctgttgagtttaataccacagatgcattccaaggaagggagtgcgaggttatcatattc tcttgtgtccgagcatctgaccgaggaatagggtttttgtccgatattcgtcgaatgaat gttggattgacacgagccaagtcatcgctttgggtgcttggaaattctcaatctcttgtc cgaggtgaattttggagggcgttgatctatgatgctcgagaacgccagctttatactgag ggagacatcctgcgaatcctgcagaaacctcaaatcagcctagacatggaattaaataac gtcgaaatggtagacgctcctgcagaagttggtaatatcccaactccttcatcaaggcca ggttcatccatggctggaagcagtaactctaggccgccttccagactgtcaaatccccag tccaccgccgaatcattgcccagcgaactgccctcaggtagtgcagtgggcacgcccgtc ccatgccttccggatggcccttctgggggtaagtctgggctaaatgacttggccatgtgc ggatattgcggaagccatcagcatatgacacataattgtgacaacatcgatgccaagata gcctgtcagggcacttgtcgaagatgcggagatgagacgcattcgattcgggattgcaaa gctgaacgctgcgttcaatgtggagaaaccggccatcttgcaaatgactgcaagtccaca acggtgctacccaaatgggaaaagaataaaatcatcaaagaagaagcccatcacaagagc atgcagcaagcgagaatagaaagacagaaacagaaggccattgcggctcacgacccgaaa ataccactaatacaggttcctggaaagaaaccttcagctgagaacacagcccctccacat aatagtggccctgggaagaggaaacgatctgacccccaggcttcaagtgacccaaaggta atgcgacttgaccagagcactgcatcttcgactcctccgaaggattccaaaggaaagaaa caagacggcagcacctctgccgcagcacagacaccagctgtaaacctgccaaaaggcccg agaggacgaaaagcggatcctcacagcgttgcgccgcccccaagtgtatgctaa

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