Trichophyton benhamiae: ARB_02560
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Entry
ARB_02560 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
abe
Trichophyton benhamiae
Pathway
abe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ARB_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_02560
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
ARB_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
I-set
Motif
Other DBs
NCBI-GeneID:
9524016
NCBI-ProteinID:
XP_003011278
UniProt:
D4B277
LinkDB
All DBs
AA seq
1263 aa
AA seq
DB search
MSDTPRLRSAFPRTPRSEPRTPRTSTGYHDPAVTPVPFGRGSKINFASASAVVRSANAAQ
PQDRPLIPFHIVDAPAQRLYVVAFYAALNAWRFYEYWTSTDEGDATWLFLKWLLIDATYL
FGLPVLRIPWLEWAFSTTLAIFLVHVVINVFLMFKIPLPMEAWVVSLFKMAYDRELSISG
QRVKPYDILHNSSLILGKHIVHILPEGSAVLNPDKVPLCLGHAHSSVNLPIRVNQTNPIL
IELLRFDLETGANETIVIPEKQAKTLRRQASQNYPKSEQREWLDLLYPVRKTGVYQIKKV
VDESKLAVHHRSMDTLVVNCPKASMLTRGGHKCRGALSDLTMSMHGTPPFKIKYSRTVND
VDQGISFQSIQPEGHQKLPEPEEEPTNPVLAKFSWARQQKVEVPLNESLTAFGEWTYAIE
EIHDGCGNVVNYTKNPDVDEGLWSQHHPQSQQFFVHELPRVSLSGCDTQTYLQIAKGESI
DLPVHFHDTGYGQNKDFPFTLSYSFSESGEDGDKREPTSVHEYEFKNANSKPRIKASGWY
SITGISSPYCRGEVFEPSSCYLHNPAEPQLAIRHEKIYDTCANNSVGLLVYLDLIGTPPF
RVRYSIEHSKGVQTRVHTINGLHGQLDLKPAEEGHYRYRFLDISDRIYEARSLKDSVPAL
EQDVKPPASAQFVGPLTSRKACFGEPVSMDVMFVGEPPWVLNYEVVHNGKRKKHELKSDT
DVASLSTADLVNGGVYTVGLTSVKDRSNCKRALKEEIRIEARPKRPRVGFGQIDQKRTIL
ALEGKAVDLPLRLEGEAPWKVKYQNKLDPTAGPVEKTFWNANSVLRVTDQGQYEIIGLSD
ATCPGSVDEKAHIFEVSWIARPKITEVDGVKLGPQTIIAKDEVCEGDVNSLELKFGGNRP
YTVRYEESYKAGNSNPTSRMRSLTAALNSASIPMRTTMAGNYTYKFLEIGDNLYSPEKKA
KDPIIVTQKVNPRPSARFESPSKVYGFCKEEEQEDETIPIILEGIPPFTLELAVKHHSSA
KPELLSIPNINSNRYALPVPRQYLDLGQHVISIRKVRDSRGCQRATEFDGSSVRVSISDV
PTIIPLESREDYCVGERISFSLSGHAPFEIYYTFDGVARKAKSQATTFRRIAEMPGEFKI
TSVSDGASGRCRVHKNITKVIHQMPSVRISRGGVSVVDIPEGGEAEIMFEFWGTPPFEFT
YTRSSNDGKGKKRVILDTKNDISHEHTKTIKASDEGTYEVISIKDRYCSFSTQSDKGSRR
GFF
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactccccgactacgttcggctttccctcgaacacctcgctccgaaccacgg
acccctcgaacgtccaccggctaccatgacccagccgttacgcccgtcccctttggccgg
ggaagcaagatcaacttcgccagcgccagcgctgttgtgaggtctgccaatgccgcccag
ccccaggataggcctctgataccgtttcacattgtcgatgcgcctgcacagcgactctac
gttgttgcgttttacgctgcgttgaatgcatggcggttttacgaatactggacgtctacg
gatgagggggatgctacatggctgtttttgaaatggctgctcatagatgctacatatctg
tttgggctgcctgtgctgcggatcccgtggttagagtgggcgttttcaaccacgttagcg
atattcctggttcatgtggtgattaacgtgtttttgatgtttaagattccgttaccgatg
gaagcctgggtcgtttctttgttcaaaatggcctatgacagagagctttcgatctccgga
caacgcgttaaaccttatgacatcctacacaactcgtcattaattctaggcaaacatatc
gtccatatcttgccggaaggttctgccgttctgaacccagacaaggttccgttgtgtctc
ggccatgcgcattcctctgtcaacctccccatccgagtgaaccaaaccaaccctatcctc
atagaacttctgcgctttgatctcgaaactggtgcaaacgaaacgattgttatccctgag
aaacaggccaagaccctcagacgccaggccagccaaaactatccaaaatcagaacaacga
gaatggctggatcttctctaccccgtgcgcaagaccggtgtttatcagatcaaaaaagtg
gtggatgagtccaagcttgctgttcatcatcgttccatggatactctcgttgtcaactgc
cccaaagcctcgatgttgactcgcgggggccacaagtgcagaggggcgctatccgatctc
actatgtcaatgcatggaactccgccgttcaagataaaatacagtcgcaccgtcaacgac
gttgaccaagggatctccttccaaagcattcagccagaaggtcaccagaagctgccagag
ccggaggaggagccaactaatccagtcctggccaaatttagctgggctcgccaacagaag
gtggaagttcctctgaacgaatccctaactgcattcggggaatggacttatgctattgag
gaaatccacgatggttgtgggaatgttgtcaactataccaaaaacccagatgttgatgag
ggtctttggtctcagcatcatccgcaatctcaacaattcttcgttcatgaactgcctcgg
gtatccctgtccggctgtgacacgcaaacatacctccaaatcgccaaaggagagtcaatt
gacctcccagttcatttccacgataccgggtatggacagaataaggatttccctttcact
ctcagctactcattttctgagtctggagaggatggtgataaaagggagcctacatctgtt
catgaatatgaattcaaaaatgccaacagtaagcctagaatcaaggcttctggctggtac
agtattactggtatctccagtccatactgtcggggtgaagtctttgagccgtcgtcctgc
tacctccacaatccagctgagccgcagttagctatccgccatgaaaagatttatgatacc
tgcgctaacaactccgttggtcttctggtgtacctcgatttgatcggaacgccaccattc
agggtcaggtattccatagaacactctaagggcgtacaaaccagggtgcacaccatcaat
ggcctgcacggacaacttgatttgaagcctgcagaggaagggcactacagatatagattc
ctggatatatctgatcgcatatacgaggctcgttcattgaaagacagcgtaccagcccta
gagcaggatgtgaaacctcctgcctctgcgcaatttgtcggacccctcacaagccgcaaa
gcctgcttcggcgaacccgtttcaatggacgtgatgtttgttggagaaccgccatgggtt
ttgaactacgaggtggtacataacggaaagaggaagaagcatgaactgaagagtgatacc
gatgttgcgtctctttccacggcagaccttgttaatggtggtgtctacactgttggtctc
accagcgttaaagacagatcgaactgcaagagagccctgaaggaggagattcgaattgaa
gccagaccgaaaagaccgcgcgttggatttggccagatagaccagaaacgaactattctg
gccttggagggcaaggcggtagatcttcctttaagactggaaggtgaagctccatggaaa
gtgaagtaccagaacaagctcgatcccactgccggccctgtggagaaaaccttttggaat
gcaaacagcgtccttagagtaacagatcaaggacagtatgagatcattggtctgtcggat
gcgacttgccctggatcagttgatgagaaagcacatatttttgaagtttcctggattgcc
cggcccaagatcactgaggttgatggtgtcaaactggggcctcagactattattgcaaag
gatgaagtatgtgaaggtgacgtgaactctctagagctgaaatttggtggcaaccgtcca
tacacagttcggtacgaagagagctataaggctggaaattcgaacccaacttcccgcatg
agaagtctcactgctgcccttaactctgcctctataccaatgcggactactatggctgga
aattacacctataagttcctggaaattggagataatctctatagccctgaaaagaaagca
aaggatcctattattgtcacccagaaggtgaatccccgtccatcagctcggtttgagtct
cctagcaaagtgtacggattttgcaaggaggaagaacaggaagatgagacaatcccgatc
atacttgaaggtatacccccgttcacgcttgaacttgctgtcaaacatcattcaagcgcg
aagcctgagcttctttctatccccaacatcaattcaaaccgatatgcactgcctgttcct
cgccagtaccttgatcttggacagcatgtcataagcatccgcaaagtccgagattcacgt
ggctgccaaagggcgaccgaattcgatggatcatcggtcagagtatccatttctgacgtg
ccaaccattattccacttgaatcacgagaggattactgtgtcggcgagagaatatccttc
tccctttccggccatgcgccgtttgaaatctactacaccttcgatggtgtggccagaaag
gcgaagagccaggccacgaccttccgacgtattgcggaaatgcctggtgaattcaagatc
acatcagtcagtgatggagctagtggaaggtgtcgagttcataagaatatcaccaaagtg
atacaccagatgcccagcgtcaggatcagccgtgggggtgtgtctgttgtcgacataccc
gaaggcggtgaagcggagatcatgtttgagttctggggaactcctcccttcgaattcact
tatacccgcagctcgaatgacggcaagggcaagaagcgtgtcattctcgacactaagaat
gacatatctcatgagcacacgaaaactatcaaagcttcagatgagggaacatacgaagtt
atatccatcaaggaccgttactgttctttttcgacacagtctgataaagggagccgacga
ggcttcttttaa
DBGET
integrated database retrieval system
