KEGG   Trichophyton benhamiae: ARB_03075
Entry
ARB_03075         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
abe  Trichophyton benhamiae
Pathway
abe03022  Basal transcription factors
abe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ARB_03075
  09124 Replication and repair
   03420 Nucleotide excision repair
    ARB_03075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abe03021]
    ARB_03075
   03400 DNA repair and recombination proteins [BR:abe03400]
    ARB_03075
Transcription machinery [BR:abe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     ARB_03075
DNA repair and recombination proteins [BR:abe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     ARB_03075
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 9525726
NCBI-ProteinID: XP_003010374
UniProt: D4B3N6
LinkDB
AA seq 414 aa
MADSGAAANDPSLLTVILDTNPHAWAQLQETLPLSSAVANLLVFINAHLACNYANKVAVV
ASHSHQAVWLYPTPPAAAPGDAATDSQKKHLRPSNNDRDGDTPMTDYGEPVVSPQAQQLE
QQPNKYRPFLLVEQQLTRNLNRLLTRTRAEEISPSSASSSSSSTMMAGALSLALSYINRE
TIAYLDTHGTAAGSDPAAGGAGGLPPPPGGAPPTSDKANAAAATDAGALQSRILIISVSS
AANSAQQYIPIMNSIFACQRLHIPIDICKLAGDAVFLQQACDATRGIYMSLDSPRGFLQY
LMLAFLPDQRARRNLILPTRVDVDFRAACFCHRKVVNVGFVCSICLSIFCEPPEGANCLT
CGTHLALGDYGAKPIVVSRKKKRKKGSAKTLNGAGNGVSSGPATPSSMATTPAP
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcggattcaggcgccgcagcgaacgatccttcgctgctgacggtcatcctggataca
aacccgcatgcttgggcacagcttcaagagacgctcccgctctcctctgccgtggcgaac
ctgctggtcttcatcaacgcccatctggcatgcaactacgcaaacaaagtggccgttgtg
gccagtcacagccatcaggccgtctggctgtacccaactcccccggccgccgctcctggt
gatgccgctaccgactcgcaaaagaaacacctccggccgtccaataacgatcgggacgga
gatacacccatgaccgactacggagaacccgtcgtctccccgcaagcacagcagctggaa
cagcagccgaacaagtaccgtcctttcctcctggttgagcagcagttgacccgcaacctc
aatcggcttctcacgcgcacccgagcagaagaaatatccccttcttctgcttcttcctcc
tcctcttctaccatgatggccggcgccctctcccttgcactcagctatatcaaccgcgaa
accatcgcttaccttgatacacatggaaccgcggccggctccgacccagcggcaggcgga
gcgggcggcctccccccacccccgggcggcgcccctcccacatcagataaggctaatgct
gccgctgctacagatgctggtgctctccagtctcgtatccttatcatctccgtcagtagt
gctgcaaactcagctcagcaatacatacccattatgaacagcatctttgcctgtcagcgt
ctccacatacctatcgacatctgcaagctagccggtgatgctgttttcctacaacaggcc
tgtgacgctactcgtggcatatacatgtctttagactccccgcgggggtttttacaatat
ctcatgctcgcctttttacctgatcagcgagcgaggcggaacctgatactgcctacccgt
gtcgacgttgatttccgcgctgcttgcttctgtcaccggaaagtcgtcaatgtcgggttt
gtgtgtagtatctgtctcagtatcttctgcgaaccacctgagggtgccaattgtctgact
tgtggcacccatctagctctgggtgactatggagccaaaccgatcgttgtttcacggaag
aagaagcgtaagaaaggttctgcaaagacactcaatggagcaggcaacggagtctcttcc
ggtccagccaccccgagttcaatggcaaccaccccggctccctga

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