Trichophyton benhamiae: ARB_03102
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Entry
ARB_03102 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_03102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abe03041
]
ARB_03102
03009 Ribosome biogenesis [BR:
abe03009
]
ARB_03102
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ARB_03102
Spliceosome [BR:
abe03041
]
Complex A
U2 snRNP components
U2 related factors
ARB_03102
Complex B
ARB_03102
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
ARB_03102
Ribosome biogenesis [BR:
abe03009
]
Eukaryotic type
90S particles
Helicases
ARB_03102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
ResIII
AAA_23
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9525753
NCBI-ProteinID:
XP_003010401
UniProt:
D4B3R3
LinkDB
All DBs
AA seq
763 aa
AA seq
DB search
MAARSDSENASRAKRLKTTAESDPRSNPYLAHMYENEDASSGINDESPLAAFRRHETTAE
MANEVESGSVNPFTGKPFSSRYVSILKTRRDLPVHQQRNEFLKLYQESQILVFVGETGSG
KTTQIPQFVLYDDLPQFRGKLVACTQPRRVAAMSVAERVANEMDVKLGEEVGYSIRFEDK
TSSKTILKYMTDGMLLREAMHDHDLKRYSTIILDEAHERTMATDVLMGLLKEVVLRRPDM
KLIIMSATLDAQKFQRYFSDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATE
PEGDILLFLTGEEEIEDAVRKISLEVDEMIREVDAGPMKVYPLYGSLPPAMQQRIFEPPP
PPRKPKGRPGRKCIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKA
SAQQRAGRAGRTRPGKCFRLYTEGAFKKELIEQTYPEILRSNLSSTVLDLKKLGIDDLVH
FDLMDPPAPETLMRALEELNYLACLDDDGNLTALGRLASEFPLDPALAVMLISSPEFYCS
NEILSITSLLSVPQIFVRPVAQRKRADEMKALFSHPDGDHLTLLNAYHAFKGPEAQANPR
QWCHDHFLSLRSLQSADNVRLQLQRIMEREEIELVSTPFEDKKYYENIRRALVAGFFMQV
AKKESQGKNLYRTVKDNNEPVLLHPSTVLGYEAEWVLYNEFVLTTKSFIRTVTAVKGEWL
LDISPAYYDISSFPKGEIRSALIRAGERLSRKEKMRSDASKKR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcggagtgacagtgagaatgcgtctcgcgccaaaagactaaaaacaacggca
gaatcagaccctcgatcgaacccgtacctcgcccatatgtatgagaatgaggatgcatcc
agtgggataaacgatgaatcgcctctcgcagctttcagaagacacgagacaaccgcagag
atggcgaatgaggttgagagcggcagtgtgaaccctttcacaggcaaaccgttttccagc
cgatatgtctccatactcaagacccgtcgcgacctcccagtccatcagcagaggaatgaa
ttcctcaagctctatcaagaatcgcaaattcttgttttcgttggcgaaactggttcggga
aagactacacaaattccacaattcgtgctatacgatgatcttcctcagtttcgaggaaag
ttggttgcctgtacccaaccgcgacgagttgctgctatgtcagttgccgagcgtgttgca
aacgagatggatgttaagcttggagaagaggttggatatagcattcgattcgaggacaag
actagctccaaaaccatactcaagtatatgacggatggtatgttgttgcgcgaagctatg
catgatcacgatctcaagcggtatagcaccatcatacttgatgaagctcatgaacgtaca
atggcaacggatgtcctcatgggtcttttgaaggaagtcgtactgcgtcgtccagatatg
aaacttattatcatgtctgctactttggacgcacagaagttccaacgctacttttccgat
gcgccattactggcggttcctggaagaacccatccagtagaaatattctataccccagaa
ccagagcaggactatgttgaagccgcgatccgcacggtcttacagattcatgctaccgag
ccagaaggtgacattcttttgtttttaacaggagaggaggagatcgaagatgccgttcgc
aagatttctctcgaagtagacgagatgatccgtgaagtcgatgctggaccaatgaaagtc
tatcccttgtatggttctctacctccagccatgcaacagcgtatattcgagcccccaccg
ccaccccgaaaacccaaaggaaggcccggaaggaaatgcattatatccacaaacattgca
gaaacctcacttaccatcgacggtattgtgtatgtggtagatccaggattttctaagcag
aaagtatacaacccacgtattcgtgtggagtctctgcttgtatcccctatctcaaaggcc
tcggctcaacaacgtgctggtcgtgctggtcgtacccgacctgggaaatgtttccgtctc
tataccgaaggggctttcaaaaaggaacttatcgagcaaacgtatcccgaaattcttcgc
tcaaatttatcttctacagttctggatttaaagaagcttggtatcgacgacttggttcac
tttgatctcatggatcctccagctcctgaaaccctgatgcgagccttagaagagcttaac
tacttggcatgtctagatgacgatggaaacctcactgctcttggtcgattggcctccgag
tttcctttggaccctgccctggctgtgatgctgataagctctccagagttctactgctct
aatgaaatcctatctattacttccctgctctcagtgccccaaatctttgttcgccctgtt
gcacagcggaagcgtgcagatgaaatgaaggcgctattttcccatccagatggtgatcat
cttactctacttaatgcctatcatgcattcaaggggccggaagcacaagctaaccctcgt
caatggtgccatgaccatttcctctccctacgatctctgcagtccgccgataacgtccga
ctacagcttcagcgtataatggagcgggaggaaattgaattagtctctaccccatttgaa
gataagaaatattatgaaaatatccgccgcgcgcttgtagctggatttttcatgcaggtt
gccaagaaagagagtcaagggaaaaacttgtatcgcactgtcaaggataacaatgagcca
gttttattgcatcctagcacagttttgggatatgaggctgagtgggtcttgtacaatgag
tttgtcttgactacaaagagctttattagaactgtcaccgcagttaagggggaatggctc
ttggacatttctcctgcgtactatgatatctctagtttcccgaaaggagaaattcgatcc
gcattgattcgagctggcgaaaggttatctcgaaaggaaaagatgcgatctgatgcgagc
aagaaaagatga
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integrated database retrieval system
