Trichophyton benhamiae: ARB_03180
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Entry
ARB_03180 CDS
T01611
Name
(RefSeq) DNA polymerase POL4, putative
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ARB_03180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abe03400
]
ARB_03180
Enzymes [BR:
abe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ARB_03180
DNA repair and recombination proteins [BR:
abe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
ARB_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
9525831
NCBI-ProteinID:
XP_003010479
UniProt:
D4B3Z1
LinkDB
All DBs
AA seq
671 aa
AA seq
DB search
MDKEIFCGELYASNKEDQDDDCVLSTLRNSRQREVKNRTEDPNAISEKALPREASERETV
GVPGLDHSIKPNKKPKLARDGRRKKIKESSNTVNDHPSVLDGLVLCKSPGEFPREYKLEE
NANQLADFIPNDDISQARRIRISRVLKFGATRAAKFDTSVTHIVAERWLNYEDVVEYLQV
SSVPANIILVNENYPSECIVNRRILDASSPRFQIKRKLLPQPHGIPSGERHDCIPTNSSR
GTDSKKVGDKSTEEAVPVPPGHLPDFPAKDTADQDGMEASEPDHLDIAIRHVKNIAALPL
DSSDEEDDGIVPGEFQADLTTDCPAWQKSFTCMNKMDGKDRADNPNSRTIEVLQQMLSYY
ERTADQWRCLAYRRAIAALRRERNKVVSKSQALEIKGIGERLAAKIEEIVWTNRLRRLEQ
ANMEPSDALLSQFLNIYGVGYQQASKWVAQGYKSLDDLKNRANLTTNQKIGIERYDDFQK
RIPREEVKAHGAIVREAVVAMDSSYTVIIGGSYRRGAADSGDIDLIITKEGASLQEIHDQ
IMTIVVPQLFERGFLKTGLAVSSRADGSKWHGASALPGNPVWRRIDLLFVPGDELGAALI
YFTGNDIFNRSLRLLASKKGMCLNQRGLFADIMRGPGRVKLNAGHLLESRDEKRIFELLA
VPWRPPEHRVC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggaaattttctgtggagagctttacgcttcaaataaggaggatcaggatgat
gattgtgttctatctacgttacgaaacagccgtcaaagagaagttaagaaccgtaccgag
gacccgaatgcgatctcagagaaagcattaccacgggaagcttctgaaagagagacagtg
ggggtaccaggccttgatcattcaataaagcctaataagaagccgaagttggctagggat
ggcaggcgaaagaagatcaaggaatcctccaatactgtgaacgaccatccttctgttctc
gacggccttgtactttgtaagtcaccaggagaatttccacgggaatataagctagaagag
aacgctaatcagctcgcagattttatacctaatgatgatatatcacaggctagacgaatt
cgcatttcaagggtccttaaatttggagcaacccgcgcggcaaagttcgatacctccgtc
acacatatagttgctgaaaggtggcttaattacgaggacgtggttgagtaccttcaagtg
tcctctgttccagccaatattatcctggtaaatgagaactatccatcagaatgtatcgtg
aaccggagaatattggatgcttctagccctcgcttccaaattaaacggaagttgctgcct
cagccacatggaatacctagcggtgaacgacatgattgcattcctacaaattccagtcga
ggtaccgactccaaaaaggttggcgacaagtccactgaagaagcggttccagtacctcca
gggcatcttcccgattttccggccaaagatacggctgaccaggatggtatggaagcatct
gagccagatcacctagatatagcaatcagacatgtgaaaaatatagctgctctccctctg
gattcctctgatgaggaagatgatggaattgtccctggagaatttcaagctgatctcaca
acagactgtcctgcgtggcagaagtcattcacctgcatgaacaaaatggatggaaaagac
cgtgcggacaatcccaactctcgcacaatcgaggtcttgcagcaaatgcttagctactat
gaacgaaccgccgaccaatggcggtgtcttgcatatcggcgtgcaatcgctgctctacgt
agggaacgtaataaagtagtttcaaaaagccaggccttggagataaaaggaataggtgaa
cgcctggcggccaaaatcgaagaaattgtatggactaatcggctccggcggttagagcaa
gcgaacatggaaccaagtgatgctctgctctcccaatttcttaacatatacggtgttgga
taccaacaagcttccaaatgggtcgcacaggggtataaatccttggacgatttgaagaac
cgagctaatctaactactaaccaaaagattgggattgaacggtatgatgactttcagaaa
cggatacctcgagaagaagtcaaggcacatggcgctattgtgcgggaggctgttgtagcc
atggatagttcctataccgtcattattggtggctcctacagacgcggggctgctgatagc
ggagacatcgatctcattatcaccaaggaaggagccagtctgcaggagatacatgaccag
attatgaccattgtcgttccccagctatttgaacgcggattcctaaagacgggacttgcc
gtgtcctcacgagcagacgggtcaaaatggcatggtgcttcagcacttcctgggaaccct
gtctggcgccgtatagacctgctatttgtacccggagacgaactcggcgctgcactgatt
tacttcacgggcaatgatatattcaaccggagcttacggttgctggcaagcaagaagggt
atgtgtttaaaccagagaggtcttttcgcagatattatgcggggtccaggcagggtaaag
ctgaatgccggccatctcctggaaagccgggacgagaagcgaatattcgagctccttgca
gtgccctggaggccaccagagcaccgagtttgctga
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