Trichophyton benhamiae: ARB_03800
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Entry
ARB_03800 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
abe
Trichophyton benhamiae
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abe03009
]
ARB_03800
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ARB_03800
Ribosome biogenesis [BR:
abe03009
]
Eukaryotic type
Pre-60S particles
Helicases
ARB_03800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Motif
Other DBs
NCBI-GeneID:
9525340
NCBI-ProteinID:
XP_003009989
UniProt:
D4B5P1
LinkDB
All DBs
AA seq
656 aa
AA seq
DB search
LFSPPSSSMANGSSAPKNPRAWEALTPSLSQWILDAVSAMGFSRMTPVQASAIPLFMGNK
DVVVEAVTGSGKTMSFLIPVVEKLLRLDSAVKKHHVGAIIVSPTRVLLSLLAFHGPSASK
LAQLDGKEPQLDPETGKPYRSSTLSVIPQLLLGGTTTPAQDLSVFLKRSPNLLISTPGRL
LELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQKILARLPKQRRTGLFSASVSEAV
DQIVRVGLRNPVKIAVKVRGAGAEDKRTPASLQMTYLATRPSHRIPALSKLLSSISPTPQ
KSIIYFSTCAAVDYFSLVLPSLLPSSFTTVPLHGKHAPNVRQRNFTRFTQSVTPTILLTT
DVAARGLDIPMVDLVVQLDPPTDPKVYIHRCGRAGRAGRRGLSVLFLTTGREEDYIPFLD
VRKTPAAPFSTPPIITTDAEAQDATETIRRTVLADRAVHDKGQRAFVSWVRSYSKHQTSS
IFRIADIDWEDTGRSWGLLNLPKMPELKDFKGDKMLGLGPEGVNWDTFAYKDKQKEKSRL
AALAELKEKGEGARPSKKRAAAPGENSTVAWSKQLEKKGEKERKRESKRVKREQAKLEAM
TEDEKAELQRTNEMLEKVRLANIEARKMNSATSKQKKTESHISDAVDDDEPFEGFD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
cttttctctccgccatcctcgtcaatggctaacggcagcagtgccccgaagaatccccgc
gcgtgggaagctctcacgccatcactctcacaatggattctcgatgccgtttcagctatg
ggattcagccgcatgacgcctgtacaagcgtcggccatacccttgttcatgggaaataaa
gacgttgttgtggaagctgtcacaggaagtgggaagactatgtcctttttgatacccgtt
gttgagaaactattacggctggactctgctgtgaaaaagcatcatgttggagctataata
gtatcacctactcgcgtgcttctctcgcttctcgctttccatggcccttcggcgtcgaag
cttgcccaactagacggaaaagaaccacaattagatcctgagacggggaagccgtacagg
tcctctacgctctcagtaattcctcaattactgctaggaggaactacgacacctgcacag
gaccttagtgtcttcctcaagcgctcgccgaacctcctcatttcgaccccgggcaggctg
ctagaacttctgtcatctccacatgtacactgccctcaatcttcgtttgaagtgctagtt
ctcgatgaggcagaccgtctcctagatctcgggtttaaagatgacctacaaaagatcctc
gccaggctaccgaagcagaggcgaaccggtttattcagtgctagcgtcagtgaggctgtg
gaccaaatagtacgtgttggattgcgaaatccagtcaaaattgccgtcaaagtccgtggg
gctggtgcagaggataaaaggactccagctagtctccaaatgacatatcttgcgactcgc
ccttctcatagaatccctgctctatccaaacttctctcatctatctctccaaccccccag
aaatccatcatctacttctctacttgtgcggccgtggattactttagcctagttctccct
tccctattaccatcttcattcaccactgttcctctacacggaaaacacgcccccaacgtt
cgtcagcggaatttcacccgtttcacccaatctgtgactcccacaatcctccttaccact
gacgttgctgctcgaggactcgatatacccatggtcgacctggtagtacagcttgatcca
cccacggatccaaaggtatacatccacagatgtggacgcgctggtcgcgctggccgtcgt
ggattgagcgttctatttctcactaccggcagggaagaagattatataccctttctcgat
gtcagaaagacaccagctgcccccttctccactccacctataataacgacagatgccgag
gcacaggatgcaacggaaactattcgccgcactgttttagctgatagagcagtacatgat
aaggggcaacgtgcatttgtcagctgggtacggagttatagcaaacaccagactagcagt
atattccgtatagccgatatcgactgggaagacaccggtcggtcctgggggctgcttaat
ttaccgaaaatgcctgagttgaaagactttaagggggataaaatgctgggactcggcccg
gagggagtgaactgggacacctttgcctacaaggataagcaaaaagagaagagcaggctt
gctgctctagccgaactcaaggaaaaaggagaaggagctcggccatccaaaaaacgtgca
gctgcgccaggagaaaatagcacggtggcttggagcaaacagctggagaaaaagggtgag
aaggagcggaagcgtgagagcaagcgggtgaagagagaacaagctaaacttgaagccatg
actgaggatgagaaggcagaactacagcgcactaacgagatgctggaaaaggtgcgcttg
gcgaatatagaggctcgaaagatgaattctgctacctcgaaacagaaaaaaacggagtct
catattagtgatgctgtagatgatgatgagccttttgaaggctttgattga
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