Trichophyton benhamiae: ARB_04290
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Entry
ARB_04290 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
abe
Trichophyton benhamiae
Pathway
abe03013
Nucleocytoplasmic transport
abe03015
mRNA surveillance pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_04290
09122 Translation
03013 Nucleocytoplasmic transport
ARB_04290
03015 mRNA surveillance pathway
ARB_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_04290
03041 Spliceosome [BR:
abe03041
]
ARB_04290
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
ARB_04290
Spliceosome [BR:
abe03041
]
Common components
Common spliceosomal components
Cap binding complex
ARB_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
9524519
NCBI-ProteinID:
XP_003017410
UniProt:
D4AJ42
LinkDB
All DBs
AA seq
851 aa
AA seq
DB search
MVENEQRKQGHGGGYSRKRRYRDDEGGDRYRHQRRRYEEPIAAIVRRQLLNVAEPTSRRP
EDDIPKIASMIAENYSDESMKVAFEDLVLQMILEQPLKIPFIAAVILVLNTLKPEATAPI
ISNIGEQAALYVGQGHWRNAKLMLRFLGCLQGLFEGDGIFPVLEELFSRAVDLQTGSSED
SLGLELVSVILYTIPYVMASSATGFESQASALLEKTDIIASTPHTLEAIVDPFPKKQGED
EGGRLSSLGLLQKQLQGEAAQSWKLTCIPRPWKEPLTQKEPKEDGDGEEKKENEETPKTA
TKHAFPTIAVPNPVKTGPRAIFPEIYFSVYTHQDIDTVPPTSDIASSLVRDALVDTINVL
DFNRNATAKFLIDVDCYFAPDTFVKRAVPLDQLRDSPSPQKSTWKPEDVAVDAAFSQLLR
LPFPEHKLVYYHSVLTESCKIAPAAVAPSLGRAIRFVYRNIDKLDLSLAYRFLDWFSHHL
SNFGFTWKWTEWVADLELPDVHPKKAFIIGAIDKEIRLSFAQRIKGTLPEPYHELITEGK
EKDTPDFKFSQETTPYSKEGQELMKLIRQKSSDEEIEAVITSIEEQAKTHGLTDPLIAST
DVYMTSICYVGSKSLSHFLSCIERCKDRLLAIGPKSDAARRQIINSVMEYWVDQPGIGIN
IIDKLLNYTILTPLSVLEWALVDNLAAGSTLAKPHIFEMISATMRKVTNRMRQIVAARTQ
PTLYEPQLSILDETLKKEKADMLSMFQLIEDTLVPVAGGYSDGMMERTEDDSLQPENVMI
QQWGSRWLNVFRRKVAVERAFIDEAMTSAPALGTMAPPAPPLGIDEKTEESKTLEEPAMD
VEEMHDTAEID
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaaatgaacagcgcaaacagggacatggaggagggtatagtaggaagagaaga
tatagagatgatgagggtggtgatcggtatcgacaccagcgcagaagatacgaagagcca
attgctgcgatcgttaggagacagctattgaacgttgcagaaccaacttcgagacgtccc
gaagatgatatccccaaaatcgcgagcatgattgcagagaattattcggatgagtcaatg
aaggtggcctttgaagacctggttctgcagatgatcctcgaacaaccgttgaaaatacct
tttatcgctgcggttatcctcgtacttaacacccttaaaccagaagccactgccccaatt
atctccaatattggagaacaagctgctctgtacgtgggacagggccattggcgaaatgcc
aagcttatgctgcggttcctgggatgtttgcagggcctgttcgaaggcgatggtatattc
ccggtgctggaggagctattttcgcgtgctgttgacctccagactggctcgtccgaagat
tctcttggattagagcttgtcagcgtcattctctacaccattccttacgtcatggcctca
tctgccaccggattcgagtctcaagcctccgctctactagaaaagacggatatcattgcc
tcaaccccccatacccttgaagcaattgtcgaccctttccctaagaaacaaggcgaagat
gaaggcggcaggttaagttccttaggcctgcttcagaaacagctgcaaggcgaagctgcc
cagtcgtggaaacttacctgtattccgaggccatggaaagaaccgctcacccaaaaggag
ccaaaggaagatggggacggggaagagaaaaaggaaaatgaagaaactcccaagaccgct
accaagcatgcttttccaacaattgcggtccctaacccggtcaagactgggcctagggct
attttccctgagatctatttctccgtctatactcatcaagacattgatacagttcctccg
acatccgatattgcatcgtcattggttcgtgacgcattggtcgacactatcaatgttctt
gacttcaaccgaaatgcaacggccaaattcctgatcgatgtggactgctactttgcacca
gatacctttgttaaacgagctgttcctttagaccaactgcgtgactctccatctcctcag
aaatcaacctggaaaccagaagatgttgctgttgacgctgccttttctcagctcctgcgg
ttgccattcccggagcataaactggtatattaccattcagtgcttacggaatcctgcaag
atcgctcctgccgcagtcgctcctagtttggggcgtgcaattcgattcgtataccgaaat
attgataagctggacctttcacttgcttatagattcttggattggttctcccaccacctg
agcaacttcggtttcacatggaagtggactgaatgggttgccgaccttgagttaccagac
gtccaccccaagaaggcatttatcattggagccatagacaaggagattcgactgagcttt
gcacagagaataaaaggaacccttccagagccttaccatgagctaatcactgaaggcaaa
gagaaggacacgccggacttcaaattttcccaggagacaactccgtattcaaaggaggga
caagaattgatgaaactcatccgccagaagtcgtcagatgaagaaatcgaagctgtcatt
acttcaatcgaagaacaagccaaaactcacgggctgactgatcctcttattgcttctact
gacgtctatatgacttccatttgctacgtgggatccaaatctctctcacacttcctctcc
tgcatcgagcgctgcaaggaccgacttctcgccatcggtccaaagtctgatgctgcacgc
cgtcaaataatcaactcagtcatggaatactgggtcgaccaacccggaatcggcatcaac
atcatcgacaagctattgaattataccattctcactcctctctctgtcctcgaatgggcc
ctagttgacaacctcgccgcgggttcaacgttggcaaaaccacatattttcgaaatgata
tctgccactatgcggaaggtgacaaaccgaatgcgccagattgtggcagccagaactcag
ccaacgctatatgaaccgcagctcagcattctagatgaaacgctcaagaaagagaaggcg
gatatgctttctatgttccagctgatcgaagatacactagtccccgtagctggtggctat
agtgatggcatgatggagcggacggaggacgactcactccagcctgaaaatgtgatgatc
cagcagtggggaagcagatggttgaacgtctttagacgcaaggttgcagttgagagagcg
tttattgatgaggcaatgacctccgctccggctcttggaaccatggctcctcctgcacca
ccgctgggaattgacgagaaaaccgaggaaagcaagacactcgaggaaccggctatggat
gtcgaagaaatgcacgacactgcagagattgactag
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