KEGG   Trichophyton benhamiae: ARB_04305
Entry
ARB_04305         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
abe  Trichophyton benhamiae
Pathway
abe03030  DNA replication
abe03410  Base excision repair
abe03420  Nucleotide excision repair
abe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ARB_04305
   03410 Base excision repair
    ARB_04305
   03420 Nucleotide excision repair
    ARB_04305
   03430 Mismatch repair
    ARB_04305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abe03032]
    ARB_04305
   03036 Chromosome and associated proteins [BR:abe03036]
    ARB_04305
   03400 DNA repair and recombination proteins [BR:abe03400]
    ARB_04305
DNA replication proteins [BR:abe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    ARB_04305
  DNA Replication Termination Factors
   ELG1-RFC complex
    ARB_04305
Chromosome and associated proteins [BR:abe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    ARB_04305
DNA repair and recombination proteins [BR:abe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     ARB_04305
  Check point factors
   HRAD17(Rad24)-RFC complex
    ARB_04305
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_16 AAA_14 nSTAND3 RuvB_N Gp44_lid DNAX_ATPase_lid Viral_helicase1 Mg_chelatase AAA_assoc_2 Rad17 MeaB NTPase_1 TniB AAA_24 AAA_3 KTI12 AAA_11 SLFN-g3_helicase AAA_19 AAA_18 AAA_28
Other DBs
NCBI-GeneID: 9524534
NCBI-ProteinID: XP_003017424
UniProt: D4AJ56
LinkDB
AA seq 362 aa
MAHAESSTAAANKIARADVSGAPVNYELPWVEKYRPIFLDDVVGNTETIERLKIIARDGN
MPHVIISGMPGIGKTTSILCLARQLLGDTYKEAVLELNASDERGLLNYALNLFRIDVVRN
RIKGFAQKKVTLPPGRHKLVILDEADSMTSGAQQALRRTMEIFSTTTRFAFACNQSNKII
EPLQSRCAILRYSRLTDAQVVKRLMQICEAEKVKYSDDGIAALVFSAEGDMRQAINNLQS
TWAGFGFVSGDNVFRVVDSPHPVKVQAMIKACWEGKVDIALDTLNELWELGYSAHDIIST
MFRVTKTIPNLSEHSKLEFIKEIGFTHMRILEGLQTLVQLSGCIAKLCKINMKPELFKAQ
KS
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcacacgcagaatcatctactgctgctgccaataaaattgcccgcgccgacgtttct
ggtgctccggtcaattatgaattaccctgggttgaaaaatatcgaccaatttttctagac
gatgttgtgggtaatactgaaacgatagaacggctaaagattatcgctcgcgatggaaac
atgccccatgtcattatttctggcatgcctggaataggaaagacaacctcgattctctgc
ttagcaagacaattgttaggcgatacatataaggaggccgtactagagctcaatgccagt
gatgaacgaggtttgctaaactatgctctgaatttgttccgcatcgatgttgtccgtaac
agaataaaaggattcgcacagaagaaagtcacattaccccctggcagacataagcttgtc
attcttgatgaagcagacagtatgacatctggcgctcagcaagcccttcgacgtactatg
gagatattttcgactacaactcggtttgcatttgcatgtaatcaatctaacaagattatt
gaacctctacaatctcgttgtgcgattctcaggtactcgcgcttaacagatgcccaggtt
gtgaagcggttgatgcagatatgtgaagccgagaaagttaaatattctgatgacggaatt
gctgcactggtgttcagcgcagaaggtgatatgcgacaggcaatcaacaatttgcagagt
acatgggctggatttggctttgtgagcggtgataatgttttcagggttgtagatagccca
cacccagtcaaagtgcaggcaatgatcaaagcatgctgggaaggaaaagttgatattgcc
ctggatactctgaatgagttgtgggaacttgggtactctgctcatgatatcatatcaacc
atgtttcgagtaactaaaactatacccaatctctctgaacattcaaaattggagttcatc
aaggaaattggatttacccacatgcgaattctagaaggactacaaaccctggtgcaactc
agtgggtgtattgccaaattatgcaaaatcaacatgaaaccagagctgttcaaagctcag
aagtcatga

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