Trichophyton benhamiae: ARB_04684
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Entry
ARB_04684 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
abe
Trichophyton benhamiae
Pathway
abe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARB_04684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_04684
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
ARB_04684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_CcmH_CycH
TPR_17
TPR_2
TPR_19
TPR_12
TPR_14
TPR_1
TPR_11
TPR_16
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
9522647
NCBI-ProteinID:
XP_003017800
UniProt:
D4AK82
LinkDB
All DBs
AA seq
1424 aa
AA seq
DB search
MAPKSALKAIRVDLDAGDYSQAAVKASELCTQDPKNYHAEKLNEYDASEKAYELAIKIKD
SDKTAWQGLVALYESQGRKKLEAYATAVERLCSIFADTYACPLYLLKYDDEMTNPFASEE
YGRAHGVLEKYINFVKLHGSKLQYIHALQLRLPTSPIYKCVEGLAPRPSETYLRVAELAE
QEEKEFINREIGERRTRLGARIDQVTTEVKREAFNRSVLNELYQGIIDWVHDDQTRRYYE
EKLLQRHYDHLRVLPSKEKPTGRELVVKAARDMVIIKHPFELAWRITFDWTDTEDLSSLD
VTLLRDFIRLFPDHGLSKILNGFLYTNLSPFPYQNLYNDVERTNTTENPEMEAQYMVADH
LLIMSEGLDQASDSVLAHRIMGVVYSHLGEFQTVIKVSRSGLAINSTIRHDTGLKLQNTD
DSLNILLATALIPHQSPRHHPEAKAIFQDILSRKPQEDSCLLGLGLILEESHDFAAAKDL
LAQALIRDENNAKVRSELFWCKVQNGELAAALKGFEETLPLVQCPGSRWHNLRAEVLYRI
GFCEWELDPSPSARKNRNGAYSKFLASIQADMNYAPAYSSLGVYYADYKKDKKRSQRCFH
KAVELSSSEIMAAERLARDFAAQGDWDLVEAIAQRVVDSGKAKPSPGSKRPGYSWPFAVL
GVVEINRQLYAKSIVHFQTALRISPNDYQCWVGLGESYYNSGRYIAATRAFRNAQSLECT
LPESERGQIWYSKYMMANLERELGNYAQAIMMYEDVTHLRIEEFGVSVALLQTLTESAWK
AAESGFFGAATETAKRAIETGLSITNYHPNGFNLWKSIGDAFSIFSWISNKSSHLPLAPF
RAVLKTTCDVTAFNILSNLDGVGENFDILFESLLGSNETAQVISIYATILAFKYALSATA
KDTHAQALAWYNLGWAEYRAHTQRSSFLKGPRSNKRTGFIKAATRCFKKAIELEAGNADF
WNALGIATALQSPKVAQHAFVRSLHLNERNAFVWANLGAFYLLNDDYQLANEAFTRSQSA
DPDHSNAWLGQGLLAILIGDAVEARELFTHAFGLGNSNGAFAKQQYAMSMFDDISSSPEA
TPAQLLQPLFGLRQLRSVDPSELFNYHLSSLFAERTGDLEDCISDLETVCSGVEAAYEST
ESISSLLKYAQASADLARIQLGRLEYKEAADSAETALNLMVEEGIHEYHGGLYQVIRLSA
HLTAGLAFYYLGRMDESIEMFRDAIQGANNSPDVTCLLAQVLWAKGGDEERLVAREQLFE
CVEKYPEHVGAITLLGVIGLLDTDEDTIEAVESDLQAMRARTDLDTHSIGKIVKLLASIP
ALRYEAEAEAMRTSEMLKQATLSVMTSPSQPQGWMALSSVSTERYAAEMAVRTALVNIPP
RGKLDAEALCQAYSLVGTRKSALSGVMVAPWSKNGWDELIQCCS
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggctcctaaaagcgctttgaaggcaatcagggtggatctagatgcaggagattactct
caggcagctgtaaaggcatctgagctttgcacccaggatcccaaaaactatcacgcagag
aagcttaacgagtacgatgcatctgaaaaggcgtatgagttggctatcaagataaaagat
agcgataagactgcctggcagggcctggtggcgctctacgagtcacagggccggaaaaag
ttggaggcgtatgcgacagctgtagagcgcctctgtagtatctttgcggatacgtatgca
tgcccgctatacctcttgaagtatgatgatgaaatgactaacccttttgctagtgaggag
tatggccgagctcatggagtgctggaaaaatatatcaactttgtgaaattacatgggtcg
aagcttcaatatatccatgcccttcaactacggctacccactagcccgatctacaagtgt
gtagaggggttggcccctagaccttcagagacatacctgcgtgtagccgagcttgccgag
caggaagagaaagagttcatcaatcgtgagataggtgagcgtaggactaggctaggcgca
aggattgatcaggttactactgaagtaaaacgtgaagctttcaaccgcagtgtactcaac
gagctataccaagggattattgattgggtacatgatgaccagacacgccgttactatgaa
gaaaagctgcttcagagacattatgaccaccttcgcgttcttccttccaaagagaaaccc
acaggcagagaattggttgtgaaggcagcgcgcgatatggtaattatcaaacaccccttc
gagctggcttggagaattacattcgactggaccgacaccgaagatctctctagtctagat
gttaccctgcttagggatttcatccgcttgtttcccgaccatggccttagtaagattctc
aatggctttctctatactaacctttccccatttccttaccaaaacctatacaatgatgtt
gagagaacgaacacgaccgagaaccctgaaatggaggcccaatatatggtagcagatcat
ctattaataatgtcagagggtttagaccaagcttctgattcggtcttggctcatcgaatc
atgggggtggtatattctcatcttggggaattccagacggttatcaaggtctctcggagt
ggcttggccatcaactctacaataagacatgacaccggacttaaactccagaacactgat
gattcattgaacatcttgcttgctactgccctaatcccacatcagtccccaagacatcac
ccggaagctaaagccatatttcaagatatactttcaaggaagccccaggaagatagctgc
cttctcgggctagggctgatcctggaggagagccacgactttgctgccgctaaggattta
ctagctcaggcattgatcagagatgaaaataatgccaaggtccgcagcgagttattctgg
tgcaaggtccaaaacggggaactggcggctgccttgaaagggttcgaggaaaccttgccc
cttgttcaatgcccgggttcacgctggcataacttgagggctgaagttttataccgcatc
ggtttttgtgagtgggagctggatccatccccttcagcaaggaaaaaccgcaatggcgct
tactccaagtttctggcctccattcaggcagatatgaactatgcaccagcctattctagc
cttggggtgtattatgccgattacaagaaggataagaagagatcccagagatgttttcat
aaggccgtggaactctcatcttctgagataatggcagctgagcgcttagcacgagatttc
gctgctcaaggtgactgggatctggttgaggccattgcgcaaagagttgtggattcagga
aaagcaaagccttctccaggatccaagaggcctggctatagttggcctttcgctgtctta
ggtgttgttgaaataaacagacaactctacgcaaagagtattgtccattttcaaacggca
ctaagaatatcgcccaatgattaccagtgctgggtgggcttgggtgaaagctattataac
tcagggcgatacattgcggccaccagagcattccggaatgcgcaatcattggaatgcact
ttgccggagtctgaacgagggcaaatatggtactctaagtatatgatggcgaatttagaa
agagagctcgggaattatgcgcaggcaataatgatgtatgaagatgtcacacatctgaga
attgaggagtttggggtatctgttgcattgctacaaactctaactgagagtgcatggaag
gcagctgagtccggtttttttggggcagccactgagacagcgaagcgagcaatcgagacc
ggcttatctattacaaattatcatcctaacggattcaacttatggaagtcaattggcgat
gccttctctatattttcctggataagcaacaagtcatcacatttaccactcgcacctttt
agggcagtactcaaaacgacctgcgacgttaccgctttcaatattctttccaaccttgac
ggagttggggagaactttgacatattgtttgaaagtttgctgggtagtaacgaaacggcc
caggtgatctccatatatgcaactattctagccttcaagtatgcgctatctgctaccgca
aaagatacccacgcccaggcattagcctggtataacctaggctgggcagagtatagagct
cacacgcaacgatcatcgtttttgaaaggcccaagaagtaataagcggacagggttcatc
aaagctgcaactcggtgttttaaaaaggcaatcgaacttgaagctggcaatgctgatttt
tggaatgcactgggtattgctactgcgttacaaagcccaaaggtagcccagcatgcgttt
gttcgcagtcttcatctcaacgagcggaatgcattcgtatgggctaatcttggagcattt
tatctcctaaatgatgattatcaattagcaaatgaagcgttcactcgctcgcaatcagct
gacccagatcactcaaatgcctggctaggccagggactattggccatacttattggagat
gctgtcgaggcaagggaactatttacacacgcgtttgggcttgggaattcgaatggagct
tttgcaaagcagcaatatgccatgtctatgtttgatgacatcagtagtagtcccgaagct
acaccagctcaactactccaacccttatttggcctacgtcagctgcgctccgtggaccct
tctgaactattcaattatcatctctcatcactttttgcggaacggaccggagaccttgaa
gactgtatttcagacttagagacggtgtgttcaggggtggaagcagcatatgagtcaaca
gagtccatcagttcgctgctaaagtatgctcaagcgtctgctgacttggcgcggatacag
ctgggccgccttgaatataaagaagctgcagacagtgcagaaacagcactaaatttgatg
gtagaagaagggatacatgaataccatggtggactatatcaagtgattagactatcagcc
catttaacagctggcctggcattctactatcttggtcgaatggatgaatctattgagatg
ttccgtgatgcgattcaaggggctaataattcaccagatgttacatgcctgcttgcgcag
gtactgtgggcaaagggcggagacgaggagaggctagttgctcgagaacaactcttcgag
tgtgttgaaaaatacccagaacacgtgggagctatcactctgctaggagtcattggcctt
ctagatacggatgaggacaccattgaggctgtagagtcggatctccaagccatgagggca
aggactgatctagatactcatagcatcggaaaaattgtgaagctgctagcaagcatcccc
gctctaagatatgaggcagaagcagaggcaatgcgcacctctgaaatgctgaagcaagcc
acgttgtcggtaatgacatcaccaagccagccacaaggctggatggccctttcttcagtg
tctactgaaaggtacgctgccgaaatggctgttcgaacagcacttgtcaacattccgcct
cgtggaaagctcgacgctgaggctctttgccaggcatattcactggtgggaacaaggaaa
agtgcattaagcggagttatggtagcgccttggtctaaaaatggctgggacgagttgatc
caatgttgttcttga
DBGET
integrated database retrieval system
