Trichophyton benhamiae: ARB_04754
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Entry
ARB_04754 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
abe
Trichophyton benhamiae
Pathway
abe03013
Nucleocytoplasmic transport
abe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ARB_04754
03015 mRNA surveillance pathway
ARB_04754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_04754
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
ARB_04754
mRNA cycle factors
P-body specific factors
ARB_04754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
FliD_C
DUF7738
Motif
Other DBs
NCBI-GeneID:
9521947
NCBI-ProteinID:
XP_003016465
UniProt:
D4AM64
LinkDB
All DBs
AA seq
1222 aa
AA seq
DB search
MERARKSTLNLDGVSPYLADVFEVSKSLDSSLKKNTAFIKRLRTGITAAGLPTFITDVRS
LSLHKYLSEIISAFYEGLCKLKTPGEIAAGVEIASAIHQRFGPDEFTKRLAWNLGRGLTS
PDKAQLKAWTPEVREREEKERLSRHRVLLRVVTEFWLVGLLRSLDDVERPDDSMPKCKDS
VPTLGGKGADGSSKPRQSQSAKPNQDRDEEPFPLEVLKDLLGYDREHVNLPLALLFARTY
SWDILGIKTLEEGRKTVETNGTTTDTSKEAQGGTSGDEAGTNTAQLDDPPLVPEKLQTRF
KNVLNRYLEDVKKHVSRDQKALANQSRRNAEAYVKSGEILEDRQSNFEKQTKAHEKLVSN
TQSLCEILGVEMPDLAEKDASDGTMSGSIGLVKTGEYLRGQGEGAGIWEDEEERRFYENL
ADFKGKVPAVLLEDGKKKKADGDDQPKMKPDSEGQNGTAAPEGTSKPDSQAGDSSAREPE
ESGTTIVNKSVGAQVDALLSKLPELANKEAVDQLALDFCFLNSKASRNRLVKAVQEVPKG
RSDLLPLYARLVATLGQYLPDVPQGLITYLDDEFRSLQRRKQKEFLGQVRTSNIRYLAEL
TKFGVVPEHVIFHCFKVSLDEFSRNLLENCGRYLLRNPETAPRMASFLETLGRKKSAQHL
GQQERMIIENAMYYVDPPPRPAIQQKERTPMELYIRKLIYLDMNKRNYTKILKAIRKLHW
EEPEVVNILERIFSKPGKIKYGNIHLLAIIISALYRYHQSFVIGVIDNVLERITVGLENN
DFKFNQSRISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGHEGGTPSPGKINPLDMPDDY
FRIRLVCTILDTCGVCFDRGSAKKKLDFFLTFFQYYLHTKDPIPMDVDFVIQDTFALTRP
QWKFAADFTEATKLFAEAVAQNYQVQETDKAPEPEDEAESSSSDEDIEDDAAPDIEEVST
DEAEVTANEPDDENESESEEEQIFVSRQEEERDPEAEAEFDRAFEKMVSESVESRKFERK
TMFDVPLPMRRANPREPAPVEETKEPSPTPSSTMPFSLMTKRGNRQQTRTIDLPSDSSFA
VAMKTQQQAEREEQQRIKNLVLNYDLGDDNDSNDGDSNSSPTHHFILRPNTNAKGSLKGS
DKRTSSHRDSRNDKSARSGFRALIYNHGTNCTKKIKTPIPPIKKEKEPNIRQSKFFGYQS
ANLLAVRLALNGLALNKFVFRT
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcaagaaagagtacgctgaatcttgacggcgtctcgccgtatctggcagat
gtctttgaagttagcaaatctctagattcttcgctgaagaagaacacggcctttatcaaa
cgacttcgcacaggaatcactgccgcaggcctccccacattcataaccgatgttcgctcg
ctttcgcttcataaatacctctcagaaatcatatcggctttttatgagggtctctgcaag
ctcaagacaccgggagaaatcgccgctggtgttgaaattgccagcgcaatccaccagcgt
tttggcccggatgagtttaccaaacgactggcgtggaacttgggccgcggccttacctcg
ccggataaggcacagctcaaagcctggacgccagaggtccgtgaaagggaagaaaaggaa
cgtctatcccggcacagggttctcctccgtgtcgtaacagagttctggcttgttgggctg
cttcggagtttagacgatgtagagagaccggatgattctatgcccaagtgcaaggactcg
gtgccaactttgggtgggaaaggtgctgatggaagctctaagcctcgccagtctcagtcc
gcgaaaccgaaccaggacagggatgaagaaccgttcccccttgaggttttaaaggatttg
cttggctacgatcgagaacacgtcaatttgcccttggctctactattcgctagaacgtat
agctgggacatattgggaattaagacactcgaggagggaagaaagacggtagagacaaat
ggaaccactacagatacctccaaggaagcacagggtggtacatccggggatgaagccggt
acaaacacagctcagcttgatgaccctcctctcgtacccgagaagctccaaacgcggttt
aaaaatgtgttaaacagataccttgaagatgtgaagaagcatgttagtcgggaccaaaag
gctcttgcaaaccagagtcgccgaaatgcagaggcatacgtgaaaagcggcgagatcctc
gaggatcggcaatctaatttcgagaaacagacaaaggcacacgagaaattggtgtccaat
acccaatcactatgtgagattttgggcgttgaaatgcctgacttggctgaaaaagatgcg
tctgatggcacaatgagtggcagcataggccttgtaaagactggcgaataccttcgtggt
caaggtgaaggggctggtatctgggaagatgaggaagagagacgcttctacgagaatcta
gcagatttcaagggaaaagtccccgctgtgctcttggaagacggaaagaagaagaaagca
gacggagatgaccagcctaaaatgaaacctgattcggaaggacaaaatggaactgcagcc
cctgaaggcaccagcaagccagattcacaagcaggtgattccagtgcgcgggaaccagaa
gagtccggtaccactattgtcaacaagtcagttggagctcaagtcgatgctctgctttct
aagcttcctgagctggccaacaaggaagctgttgatcaattagctctggatttttgtttc
ttgaactcgaaggcctctcgaaaccgacttgtcaaagctgttcaagaagtgccgaagggc
cgttccgatctcttacctctctatgctcgccttgttgctactctaggccagtatcttccc
gatgttcctcagggcctaatcacgtatctggacgacgaattccgcagccttcaacgccgc
aagcaaaaagaattcctgggtcaagttcgtacaagcaacatcagatacctggctgagctc
actaaattcggcgtcgttcctgaacacgttatatttcattgcttcaaagtcagcctggac
gaattttcccgaaatttgttggaaaactgcggtcggtatctcctcagaaaccccgagaca
gctccccgaatggcatcgttcttagaaacacttggacgaaagaaatctgcccagcacctt
ggacaacaggaacgaatgattattgaaaatgccatgtactacgtcgatcctccaccgcga
ccagccattcagcaaaaggagcgtacaccaatggagctgtatattcgaaagctgatatat
ctggatatgaacaagcggaactacactaagattttaaaggctattcgcaagttacactgg
gaggaacccgaggttgtcaacatcctcgagcgtatattcagcaaaccaggaaaaattaag
tacggaaatattcatctacttgcaattatcatcagcgcactatatcgctaccaccagtct
tttgtgattggcgttatcgacaatgtccttgagagaatcaccgtcggtctagagaacaat
gatttcaaattcaatcagtcacggatttcagaggtcaagtatttgggagaactctataat
tacaagatggttgactcaccagtgatcttcgataccctctaccgtattgttacttatgga
cacgagggtggaacaccatctccgggaaaaataaacccccttgatatgccagatgattat
ttccgtattcgtctggtgtgcaccatactagatacctgcggtgtttgtttcgaccgagga
agtgcgaagaagaaacttgactttttcttaacatttttccagtactatctacataccaag
gatcctatacctatggatgttgattttgtcatccaagacacatttgccttgactcgacca
cagtggaagttcgctgctgactttacagaagctaccaaactgtttgcggaggcggttgca
cagaactaccaagtgcaagagactgacaaagctccagaaccagaggatgaggcagagagc
tcatcatctgatgaagatattgaagatgacgcggctcctgatatcgaagaggtctctact
gacgaggcagaggttaccgctaatgagccagatgatgaaaatgaatccgagtcagaagaa
gagcagatatttgtatctcgtcaagaggaagagcgtgatcctgaagctgaagctgaattt
gacagagccttcgagaagatggtatctgaaagtgtagaatcccgaaaattcgagcgcaaa
acgatgttcgacgtccccctgcccatgagacgtgcaaatccccgcgaacctgctccagtt
gaagagaccaaagaaccatcccctacgccttccagcacgatgcccttctccctcatgacc
aagcgtggaaaccgccagcagacacgcactatcgacctcccttcggactccagttttgca
gttgcaatgaagacccagcaacaagcagagcgcgaggagcaacaacgaataaaaaatctg
gttctcaattatgatcttggtgacgacaatgatagcaatgatggtgatagcaacagttcc
ccaacccaccactttattctacgaccaaacaccaatgctaaaggctcactcaaaggttcc
gacaagcgaacgtcatcgcaccgcgattcaagaaatgataaatcagcccggagtggattc
cgtgctctgatttataaccatggcaccaattgcactaagaaaatcaaaactcccatacct
ccaatcaaaaaagaaaaggagccaaatatacggcagtcgaaattttttggatatcaaagt
gctaatttacttgctgtgcgtttggccttgaatggccttgcgctcaataaatttgtcttt
aggacttga
DBGET
integrated database retrieval system
