KEGG   Trichophyton benhamiae: ARB_04830
Entry
ARB_04830         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
abe  Trichophyton benhamiae
Pathway
abe03020  RNA polymerase
abe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ARB_04830
  09124 Replication and repair
   03420 Nucleotide excision repair
    ARB_04830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abe03021]
    ARB_04830
   03400 DNA repair and recombination proteins [BR:abe03400]
    ARB_04830
Transcription machinery [BR:abe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     ARB_04830
DNA repair and recombination proteins [BR:abe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      ARB_04830
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 9522023
NCBI-ProteinID: XP_003016541
UniProt: D4AKI7
LinkDB
AA seq 361 aa
MDYDAMDIEPQGPQVTVREGSPNLTSSPQAEPYRVDFRLSSVDLAFANSFRRTILAEIPT
VAIDVVEIEVNTSVLPDEFISHRLGLIPLCSKNCDTDMLYSRDCDCEAGCARCVINLSLH
AKCTTEEIMKVYARDLVVVGDRANEWVGNPVVTDPEGKGPIICKLRRGQEVKFNCIVKKG
IAKEHAKWAPTAAVGFEYDPHNNLRHVDYWFEEDPVKEWPLSANAGWETAQPKDLPFNYD
ATPNTFYIDIESIGNLEPDAVVQQGIIMMQRKLAEIISGLTGSDGQGGMVNGGVDQDGAG
ARSPDAYEPPEGIDGGFTAYGGANGAGPGAGPGAGGSGSVWGGAGGATPYGATPYGQGYG
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggactacgacgccatggacatagagccccaagggccccaagtcaccgtccgcgaaggc
tcccccaacctaacatcttccccccaggcagagccataccgagtcgacttccgtctcagt
tccgtcgacctcgcctttgccaactccttccgtcgcaccatcctcgccgaaatccccacc
gtcgcaatagacgtcgtcgagatagaagtaaacacctccgtcctgcccgatgaattcatc
tcccatcgtctcggcctgatacccctctgctcgaaaaactgcgacacagacatgctgtat
tcgcgagactgcgactgcgaagccggctgtgcgcgctgcgtcatcaacctctcgctacat
gccaaatgcaccacggaggaaatcatgaaagtgtatgccagggatctggttgttgtaggc
gaccgcgcaaacgagtgggttggcaatcccgtggttacggatcccgaggggaaaggaccg
atcatatgcaagcttcgaagagggcaggaggtcaagttcaattgtattgtgaagaagggc
attgcaaaggaacacgccaagtgggcgccgacagcggcggttgggttcgagtatgatccg
cataataacctgcgtcatgtggattattggttcgaagaggaccccgtcaaggaatggcca
ttatctgcgaacgcaggatgggaaacagcccagcccaaggacctcccgttcaactacgac
gctacccccaacacattctacatcgatatagaaagtataggaaacctcgaacccgacgca
gtggtgcagcagggtatcatcatgatgcaacggaagctcgctgagatcatttccggcttg
acgggctccgatggacagggcggcatggttaacggtggagtcgatcaagacggtgctggc
gccaggagtccggatgcatatgagccgccggaaggtatcgatggcgggttcactgcctac
gggggtgcgaatggagctggccctggtgctgggccgggtgccggcgggagtgggagcgtc
tggggcggggcaggtggtgcgacgccgtacggtgcgacgccttatggtcagggatacggc
ttttaa

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