Trichophyton benhamiae: ARB_05225
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Entry
ARB_05225 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abe03041
]
ARB_05225
03009 Ribosome biogenesis [BR:
abe03009
]
ARB_05225
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ARB_05225
Spliceosome [BR:
abe03041
]
Complex A
U1 snRNP components
U1 related factors
ARB_05225
Complex B
ARB_05225
Ribosome biogenesis [BR:
abe03009
]
Eukaryotic type
Pre-60S particles
Helicases
ARB_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2443
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
9526571
NCBI-ProteinID:
XP_003016931
UniProt:
D4ALM7
LinkDB
All DBs
AA seq
475 aa
AA seq
DB search
MSYGGGGYRDHQGGGGGYNSRGGGGYQGGSSGYSNGHSSGPSYGGGFGGGYGGGAGGDRM
SNLGAGLKTQQWDLSSMPKFEKSFYKEHPDVSARSTQEVEAFRKENEMTVYGKDVPRPVQ
TFDEAGFPQYVMSEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIV
HINAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDL
TRGVEVCIATPGRLIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQ
TCMWSATWPKDVRQLANDFLQDYIQVYIGSQDLSANHRITQIVEVVSEFEKRDRMIKHLE
RIMEDKKSKVLIFTGTKRVADDITRFLRQDGWPALCKLLTMFTLFSFMNLNHLLTYAGLA
IHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIGMINLQPPFLPFSKPISIMS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggcggtggcggttacagagaccaccagggtggtggaggtggttacaactcc
aggggtggcggcggttatcaaggtgggagcagcggatactccaacggacactccagcggc
cccagctatggaggcggctttggaggcggctatggaggtggtgccggcggtgacagaatg
tcaaacctcggggctggcttgaagactcaacaatgggatctcagctccatgcccaagttt
gaaaaatccttctacaaggaacacccagatgtttcggcccgaagcacccaggaagttgag
gctttccgaaaagagaatgaaatgactgtctacggaaaggatgttccgcgccccgttcag
acctttgacgaggctggtttcccacaatacgtcatgtctgaggtgaaagcccaagggttt
gccaaaccaactccgattcagtctcaaggctggcccatggccctctctggacgtgatgtt
gtcggtattgcagagactggttccggaaagactttgacctattgtctgccggctatcgtg
cacatcaacgcacagcctctccttgcccctggtgacggccctatcgtcctggttctcgcg
ccaactagagaattagctgtccagatccaggctgaaattaccaaatttggaaagtcctcc
cgtattcggaacacttgtgtctacggtggtgtccctagaggcccgcaaatacgtgacctg
acacgaggcgtcgaagtttgcattgctacgcctggtcgtcttatcgatatgctcgagtct
ggaagaactaaccttcgaagagttacctaccttgtcctcgacgaggctgaccgcatgttg
gacatgggtttcgagcctcaaatccgtaaaattatcagccagattcgccccgatcgtcag
acttgcatgtggtctgctacttggcctaaggatgtccgccagctggctaacgacttcctt
caagattacatccaggtgtacattggatctcaagacttgtctgctaatcatagaattacc
caaatcgttgaggtcgtatcagagtttgagaagcgcgatcgaatgataaaacatctcgaa
cgcattatggaagataagaaatcgaaggtccttatcttcacaggtacaaagcgtgtcgcc
gacgatatcacccgattcctccgtcaagacggctggccagcgctatgtaagttattaacc
atgttcaccttgttttcttttatgaacctgaatcatttactaacatatgcgggtttagct
attcacggtgataagcaacagaatgaacgtgactgggtattgaacgaattcaagaccggc
aagagcccgatcatggtggctacagatgtagcttcgcgtggtattggtatgataaatctg
caaccccccttcctccccttctccaaacccatttccatcatgtcatag
DBGET
integrated database retrieval system
