KEGG   Trichophyton benhamiae: ARB_05393
Entry
ARB_05393         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
abe  Trichophyton benhamiae
Pathway
abe03010  Ribosome
abe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    ARB_05393
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    ARB_05393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:abe03011]
    ARB_05393
   04121 Ubiquitin system [BR:abe04121]
    ARB_05393
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:abe04147]
    ARB_05393
Ribosome [BR:abe03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    ARB_05393
  Archaea
    ARB_05393
Ubiquitin system [BR:abe04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   ARB_05393
Exosome [BR:abe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   ARB_05393
  Exosomal proteins of colorectal cancer cells
   ARB_05393
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 IBR Dsc3_N DUF2604 Plexin_RBD TBK1_ULD Ubiquitin_5 UBL_UBAC1 Cytochrome_C7
Other DBs
NCBI-GeneID: 9523904
NCBI-ProteinID: XP_003015996
UniProt: D4AME0
LinkDB
AA seq 154 aa
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKTYTTPKKIKHKRKKTKLAVLKYYKVDGDGKIERLRRE
CPTPECGAGIFMAAMHNRQYCGKCHLTYVFDESK
NT seq 465 nt   +upstreamnt  +downstreamnt
atgcaaattttcgtcaagacccttacgggtaagactatcacccttgaggtggagtcttcc
gacactattgacaatgtcaagaccaagatccaggacaaggagggaattcccccagaccag
cagcgtctgatcttcgcaggaaaacagctcgaggacggccgcactctttctgactacaac
attcagaaggagtccacccttcatctcgtgctccgtctccgtggtggtggtaagaagcgc
aagaagaagacctacactaccccaaagaagatcaagcacaagcgcaagaagaccaagctc
gctgtgctcaagtattacaaggttgacggcgacggcaagatcgagcgtctcagacgcgag
tgccctacccccgagtgcggtgccggtatcttcatggctgctatgcacaaccgtcaatac
tgcggcaagtgccatctcacctacgtcttcgatgagtccaagtaa

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