KEGG   Trichophyton benhamiae: ARB_05415
Entry
ARB_05415         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
abe  Trichophyton benhamiae
Brite
KEGG Orthology (KO) [BR:abe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:abe03009]
    ARB_05415
   04121 Ubiquitin system [BR:abe04121]
    ARB_05415
Ribosome biogenesis [BR:abe03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    ARB_05415
Ubiquitin system [BR:abe04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     ARB_05415
SSDB
Motif
Pfam: WD40 WD40_Prp19 Sof1 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WD_LRWD1 NBCH_WD40
Other DBs
NCBI-GeneID: 9523926
NCBI-ProteinID: XP_003016018
UniProt: D4AMG2
LinkDB
AA seq 445 aa
MKIKALSRSAAAQQTPGTNVQRVQRNIDPSQHPFERAREYTRALNAVKMERMFASPFIAQ
LGNGHVDGVYSMAKDPISLERFASGSGDGVVKIWDLTTRDEIWHAQAHENIVKGMCWTSD
RKLLSCASDKTVKLFDPYNTPSDSAPLATYLGQGAFTSVSHHETHPSFAVASSVISIYDL
SRPSSTPSETLSWPTSTDTITSLAFNRTETSILGSTATDRSIVMYDLRTSSPVSKVILTL
ASNAISWNPMEAFNFAVANEDHNVYIFDMRKMDRALNVLKDHVAAVMDVEFSPTGEELVS
ASYDRTIRLWNREKGHSRDVYHTKRMQRVFSAKFTPDNNYVLSGSDDGNIRLWRSNASSR
GGIKSAKERQKLQYDEALKRRYAHMPEIRRIKRHRHLPKAIKKAGEIKGEEIKALKRREE
NVRKNSKVVKPRRSEREKMVLATEK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaaatcaaagctctttctcggtctgctgctgcgcagcagactcctggtaccaatgtg
caaagggtacagcggaatattgatccgtcccagcatccgtttgaacgagctcgcgaatat
acaagagcccttaatgcagtaaagatggagagaatgtttgcttccccgtttattgcacag
ctaggaaatggacatgtcgatggggtttatagcatggcgaaggatccaatttccctcgaa
cggttcgccagtgggagcggagatggtgttgtgaagatctgggatttgaccacacgagat
gaaatatggcatgcacaagcgcacgaaaatattgttaaagggatgtgctggacttccgat
agaaaactcctctcgtgcgccagtgacaagaccgtcaaacttttcgatccatacaatacc
ccctccgattctgctccgcttgcaacatatcttggccaaggcgcgtttaccagcgtatca
caccacgagacgcacccatcatttgccgtagcttcatccgtcatatcaatctatgacctt
tcaaggccttcatctaccccctcggagactcttagctggccaactagtacagataccatt
acgtccctagccttcaaccggaccgagacatccattttaggctcgactgctactgacaga
tccattgtgatgtatgacctacgtacctcatcaccagtctccaaggtgatattgactctt
gcttcaaacgctatatcttggaaccccatggaagcattcaacttcgctgttgcaaatgaa
gatcataacgtatacattttcgatatgagaaagatggaccgcgctttaaacgttctcaaa
gatcatgttgctgctgttatggatgtcgaattcagtccaaccggtgaagaactggtatct
gcatcttatgatcgtactatcagactttggaaccgggagaaaggacactcaagggatgtt
taccatacaaagagaatgcaaagagtgttctcagcaaaattcaccccagacaataactat
gttttatctggatccgatgatggtaatatacgactctggaggtcaaatgcttcctccaga
ggaggtatcaagagtgccaaagaacgccaaaaactgcagtatgatgaagccctgaaacgc
cggtatgctcatatgcctgaaatccgccgtatcaaacggcatcgacacctgcccaaagct
ataaagaaggccggtgaaattaagggagaagagataaaggcattgaagagacgtgaagaa
aatgtgaggaagaatagcaaggtagtgaagccgcgtcgaagcgagagagagaagatggtc
ttggcaacagaaaaataa

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