Trichophyton benhamiae: ARB_05541
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Entry
ARB_05541 CDS
T01611
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
abe
Trichophyton benhamiae
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abe03009
]
ARB_05541
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ARB_05541
Ribosome biogenesis [BR:
abe03009
]
Eukaryotic type
90S particles
Helicases
ARB_05541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9524133
NCBI-ProteinID:
XP_003016144
UniProt:
D4AMT8
LinkDB
All DBs
AA seq
528 aa
AA seq
DB search
MAGMLPAGSDPEDSHSESSSIAQDERETGGQDERPQKRRRLSDSSGDFPITPTTPFPVQT
LSRIKKKEVKTERQEEAASQADPITANDALAMGLQSVDSSFSSLGLAPWLVSSLKAMEIK
RPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAGPILHKWSEDPFGIYAVILTPTRELA
LQIFEQVKAISAPQSLKPLLITGGSDMRPQAIGLSQRPHIVIATPGRLADHIKSSGEDTI
IGLKRVRMVVLDEADRLLTSGPGSMLPDVETCLSALPPSSDRQTLLFTATVTPEVRALKS
MPRAKNKPPIFVTEISTENTTIPPTLKQTYLQVPLNHREAFLHVLLSTEGNSSKSTIIFC
NRTKTADLLERILRRLSHRVTSLHSLLPQSERVANLSRFRASAARLLVATDVAARGLDIP
SVGLVINYDVPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEARVGKQMVAWE
EPGVNIESRIVKGTVLKEVGSTKREAMGEIDEGRDVLGRRVRKLKKVR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctggtatgctacctgcaggctcagaccccgaggattcgcactctgagtcctcgtcc
attgcgcaagatgagagagagaccggtggacaagatgaacggccgcaaaaacgacgacgg
ctctcagattcctctggagacttcccgataactccaacaacaccatttccggtccagacc
ctatcacgaatcaaaaagaaggaggtgaagactgaaagacaggaggaggctgcatctcaa
gccgatccaattaccgctaatgatgcgctcgcaatggggcttcagtcagtagattcttcg
ttttcttctttgggacttgctccatggttggtcagctcattgaaggccatggaaatcaag
cggccgacggcgattcaaaagagctgtataccagaaataattaagggaagggattgtata
ggcggtagtaggactggttctggaaagactgttgcatttgcaggtccaatactgcataaa
tggtctgaggatccgtttggaatatatgctgttattttaaccccaacaagagagcttgct
cttcaaatattcgaacaggttaaagccatttctgcgccgcagtcgcttaagccactttta
ataaccggcggcagtgacatgcggcctcaagcgattggtctctcgcagcggccccatata
gttattgcgacgccaggcaggctcgcggaccacattaaatcatccggagaagatactata
attggattaaagcgtgtccggatggtagttctcgacgaagcggatcgccttcttacaagc
ggcccggggagcatgcttcctgatgtagagacatgtttatctgccctgccaccgtcttcg
gatcgtcagactcttcttttcacagccacagttactcctgaagtacgcgcgttgaaatcg
atgcctcgagcaaagaacaaaccgccgatcttcgttactgaaatatccacagaaaacaca
acgatacccccgaccctaaagcagacatatctccaagtgcccctgaaccaccgcgaggca
tttttacatgttcttctgtccactgagggaaattcctccaaatctaccattattttttgt
aaccgaacaaaaacagcggatctattggagcgcatccttcgccggctatcacatcgagtc
acttcacttcacagtctcttgccccaatctgaacgagttgccaacctttcgcgtttccgc
gcttcggcggctcggctactggtggcaactgatgtagcggctcgtggtttggatattcct
tcagttgggctagtcatcaactatgatgttcccaggaatccggatgattatatccaccgc
gttggtcgtacggctcgagctgggcgagaaggtgaagctataacgcttgtgggacagaga
gatgtccagctcgttttggcgattgaagcccgagttggtaaacaaatggtagcatgggag
gaaccaggggtgaatattgaatctcgaatcgtcaagggcacagtcctgaaagaggttggc
tctacaaaacgagaagctatgggtgaaattgatgagggaagagatgtccttggccgcagg
gtcagaaaattgaaaaaggtccggtag
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