Trichophyton benhamiae: ARB_05952
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Entry
ARB_05952 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
abe
Trichophyton benhamiae
Pathway
abe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
ARB_05952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abe03021
]
ARB_05952
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_05952
Transcription machinery [BR:
abe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
ARB_05952
RNA polymerase I system
ARB_05952
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
ARB_05952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW5_SPT5
Spt5-NGN
Spt5_N
CTD
KOWx_SPT5
KOW4_SPT5
KOW
KOW2_Spt5
DUF3912
Motif
Other DBs
NCBI-GeneID:
9525922
NCBI-ProteinID:
XP_003015641
UniProt:
D4ANY5
LinkDB
All DBs
AA seq
1079 aa
AA seq
DB search
MSHPGNEQQFASEDEEDFNPAPAGDSEPEAEDDQQDNRSGGKHIDNDDGQEVGKNKKEDD
EENGDEVKKMNDGENGDLNTNESQQARGEDEAGAEDDDEGEPEGDNEDDDEEEEEEEEDE
EAVTGRPRKRRRHGLGAFFEEEAEVDDEDEAEDEEDEIEAGFVHHDDEVVLPAGAETDDR
RHRELDRKRDMDATMDAEQQAQALKERYGRNRASGADLVVVPKRLLLPSVDDPSIWGVKC
RPGKEREIVFSIIKRMEERPLGSRNPIKIISAFERGGTMAGYIYVEARKQADIIDALDGM
SNIYVRSKMTLISVKEMPDLLRVKKSEELTPGGWVRIKRGRYQGDLAQLEEVETNGLNVT
VRLVPRLEYGLNEDSNAPALDPKRKRIGGGSSAIARPPQRLFSEAEAKKRHSKYLSATSS
LGGKSWSYLGDTYVDGFLIKNMKVQHLITKNVNPQLDEVTKFARGADDGTSNLDLASLAA
TIKNTTEEDAYLVGDTVEVFAGEQRGVVGQTVATRGDIVTIKVTQGELQGQHIDVPTKGL
RKRFSEGDHVKVIGGSKYRDELGMVVRIKDDRVTILTDMTMQEITVFSKDLREADDIGVD
GKLGQYDVHDLVQIDQTTVGCVVKLDRESMRVIDQNGSTQIVLPSRVLGKIEHRRHAVTT
DRNGSEIKCGDTVKEVTGEQRTGTILHIHRAFLFCTSKVVGDNAGIMVTRAINVTTVATS
GSKLGRSAPDLSKMNPALQKNGMNGSGMPPPRTFGRDRLVGKTVHIRRGPFKGLLGIVKD
TTDIIARVELHSVSKVVPVEKENLSVKDPITGQPVDINRFGGRGGGAPRVPQSMATGRAG
PQDAAWQGGRTPIAMGDSSRTPAWRASSSRTPAWNAAVGSRTPAWKAEGSRTANPYDGNR
TSYGGFGGRTPAWTSGTKTPHDAGSGFSGGSSNSGFDAFMAGSRTPGHPGAMAANSGSRT
PAWGHSGSSSSHLSANAGRAFDAPTPGGDYAAPSPAPFASAPTPGATAATPRAWPDNAPT
PGASTFAGKRMDGDAYDAPTPAGDHRPYDAPTPAIGMGFPATPGAMDDAPRYAEGTPSP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatccaggaaacgaacagcagtttgcctcagaagatgaagaagattttaatcct
gcgccggctggagattctgagccagaagctgaagatgaccagcaagataatcgcagcggc
ggaaaacacatagataacgacgatggacaagaggtcggtaaaaataaaaaagaagatgat
gaagaaaatggagatgaagtgaaaaagatgaatgatggcgaaaatggtgacttgaatact
aatgaatcgcaacaggccagaggtgaagatgaagccggtgccgaagacgatgatgaaggg
gagcccgaaggagataacgaggatgacgatgaagaggaggaagaggaggaagaggacgag
gaagcagttactggtcgccctcgaaagcgcagaagacatggactcggcgctttcttcgaa
gaagaagcagaggtagatgacgaagatgaagcagaagatgaagaagacgaaatcgaagct
ggcttcgtccaccatgacgatgaggttgtcctacccgctggcgcagaaacggacgatagg
cgccatcgtgagctcgatcgaaagcgtgatatggatgcaacgatggatgcggagcagcag
gcgcaagccctgaaagaaagatatggccgaaaccgtgcctccggagctgaccttgtcgtt
gtccccaaaaggcttctcctacctagcgttgatgacccaagcatatggggtgtcaagtgt
cgaccaggcaaagagagggagatcgtgttcagcattatcaagcgcatggaagagcggccc
cttggttcacgaaaccctatcaagatcatatctgcttttgagcgtggtggaactatggct
ggttacatctacgtggaagcccggaaacaagctgatatcattgatgccttggacggaatg
tctaatatctacgtcaggtctaagatgactttgatctcagtcaaggaaatgcctgatcta
ctccgagtgaaaaagtcagaggagcttaccccgggaggctgggttcgaatcaagcgtgga
cgataccaaggggacttggcccagcttgaagaagtcgagacaaatggacttaatgttacc
gttagacttgttcctcgtttggagtacggactcaacgaagacagcaatgcgcctgctctg
gaccccaagcgcaagaggattggaggagggagcagtgcgattgccaggcctcctcaacgc
ctgttcagtgaggcagaagcaaagaagagacactccaagtacctctctgctacatctagc
ttaggaggcaagtcttggtcttatcttggtgatacttatgttgatggcttccttatcaag
aacatgaaagttcaacatctcatcaccaaaaacgttaaccctcaacttgatgaggtgaca
aagttcgctcgtggtgcggatgatggaacttcgaatctcgatcttgcatctttggctgcc
acaatcaagaatacaaccgaagaggatgcttatctggttggagacaccgtcgaagtcttt
gcaggcgaacagcgcggcgtcgttggccagacagtagcaacccgtggcgacattgttacc
atcaaagtcacgcaaggtgaactgcaaggccagcacattgatgtgccgaccaagggtctc
cgaaagagattcagcgaaggtgatcatgtcaaagtgatcggagggagcaaatatcgcgac
gaattgggtatggttgttcggatcaaggacgaccgagttaccatccttacagacatgacg
atgcaagagatcacggtgtttagcaaggatttgagagaagctgatgacattggggttgat
ggaaaattgggccagtatgatgtccatgatttggtacaaatcgatcaaacaacggttggg
tgtgtggtgaaacttgacagagagtcgatgcgagtcatagaccagaatggctcaacccag
attgtgcttccatcacgggttttgggcaagatcgaacaccgacgacatgctgttaccact
gaccgaaatggctctgaaatcaagtgtggagataccgtgaaagaggtgactggcgagcaa
cggaccggcaccatcttacatatccacagagcgttcctcttctgcactagcaaggttgtg
ggagataatgctggtataatggtcactagagctataaacgttactaccgtggcaaccagc
ggttctaaattgggtaggtctgccccagacctgtcaaagatgaacccggctttgcagaag
aacggtatgaacggttctggaatgccaccaccgcgaacattcggcagggaccgacttgtt
ggaaagacggttcatattcgaaggggcccgttcaagggtctgctgggtatagtcaaggat
acaacggatatcattgctcgagtcgagttacactccgtttcaaaagtcgtacccgttgaa
aaggagaacctttctgtcaaggacccgattactgggcaacctgtagatatcaaccggttt
gggggcagaggtggtggcgctccgagagtaccacaatccatggcgacaggaagagctggt
ccccaagatgctgcatggcaagggggaagaacaccgattgccatgggcgattcgtctcgt
acaccagcctggcgagcgtcatcttctcgaacccctgcttggaatgccgctgtaggatct
cgcactcccgcttggaaggcggaaggttctcgtaccgccaacccttatgatggtaacaga
acctcttacggtgggtttggtggacgtactccagcctggacttctggaacaaagacccct
cacgatgctgggtccgggttctcaggaggctcttctaactcaggctttgacgccttcatg
gccggctctcgaacgccgggtcatccgggtgcaatggcagcaaacagtggctcccgtaca
cctgcctggggccactctggaagctccagctcacatctcagcgccaatgctggcagagcg
ttcgatgctcctactcctggcggtgactatgcagctccatctcctgcaccattcgccagt
gctccaactcctggagcaacagctgctactcctcgtgcatggccggataatgcacctaca
cctggtgcctcaacgtttgctggaaaacgtatggatggtgatgcttatgatgcgcctaca
cccgctggtgatcatcgaccatatgacgcaccaactcctgcaatagggatgggcttccct
gctacacctggcgccatggacgatgcacctcgatatgcagagggcactccaagtccatga
DBGET
integrated database retrieval system
