KEGG   Trichophyton benhamiae: ARB_06040
Entry
ARB_06040         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
abe  Trichophyton benhamiae
Pathway
abe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ARB_06040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abe03021]
    ARB_06040
Transcription machinery [BR:abe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     ARB_06040
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 9526010
NCBI-ProteinID: XP_003015729
UniProt: D4AP73
LinkDB
AA seq 749 aa
MVRRRPKPADPLVRPKKRPIPRPTAPGQPQPQGQPQGYMQGQVRPTTANGTSTLPLQPPR
HQPPASTLPQPKPIPSADDLTTNGFSGPLLSETYSDYPLVTTKRALREGLRHHIAKLISK
KSVDPRDESQFTRPVRLQRRDPRATTTSPAGNEKEDANPRRGFRDPYAGLTEAERQEMEA
KKEARAKEREDNLAQIAPSVNSGPKKVNAPKQRTQQVFKSIITPEEAAKSQIKYEEALPW
HLEDFDNKNIWVGKYEAAMSETYATFVLERSGKMRMIPIDKWYKFTAKNQFKVLTIEEAE
KHMARKIRDPRWFMEKEQARAQERELQRYARQRKIYTGQSRNAPVTDRFEGDDMDFDEDR
FADDEEHVGLFDDDEDAKTAEKRIKQDQLKANIFDLKDEKDYDEEEHLEKKQKEDLKSFG
KQVRKALQRREKNFDYSSGSDANPYSDDESTDESELERQKEEQKKSEEDPKRKDNQADKP
SGTSTKGTNTPSGRPKHTDPLKRAQAAARKRPGSPNLSDASGTDSSRKKPKNKHLSAQIS
NSQPTSRPISPVPQAQRKSSGTANANDATSSTAQTAAGAKKRIRTVPGKAGSASDVEKAA
NSGAEMSDSTMAKRMKLNVPGAKSKTGTPIGSRAGSPTPAGKAVTGSRASSPESSRGIST
PSGSGSRRGSVSGANPGAGAPPPASFPTASEIHAAIPANGILSNDLLRMFRSRLGNSREN
HRRFIGIVKDVSVFGKEDKLLRPGVIKEA
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggtcagacggcgccccaagccagccgatccactcgttcgaccaaagaaacgacctatt
ccacgacctactgctcctggccagcctcagccccagggtcagcctcagggatatatgcaa
ggtcaggtcaggcctacaaccgcaaatgggacgtcgacccttccgctgcagcctccacga
catcaacctccggcgagcacgcttccacaaccaaaacctatccccagcgctgacgatctc
actaccaacggcttcagcggtccgttgctctctgaaacgtactcggactacccgctagtt
acaacaaaacgtgcgctcagagaaggattaaggcaccacatcgcaaagctcatatcaaag
aaaagcgtggaccccagggatgaatctcaatttacacgccccgtaaggttacagcgacga
gatccaagagctacaaccacctctccagcaggaaatgagaaggaagatgcaaatccccga
cgagggttccgtgacccttacgctggtctgactgaggccgaacgccaggagatggaagct
aagaaagaagcacgggctaaagaacgtgaggataacctggcgcagattgctccctccgtc
aattcaggacccaagaaagtgaacgcccctaagcagcggacacagcaagtattcaaatct
atcatcacaccagaggaggccgcaaagtctcagattaaatatgaggaggccttaccttgg
catctggaagattttgataataaaaatatttgggttggcaagtatgaggctgccatgtca
gagacatacgccacatttgttttggagcgcagcgggaagatgcgaatgatacccatcgat
aaatggtacaaatttactgccaaaaatcagttcaaggtcttgaccattgaagaggcagag
aagcatatggccaggaagattagagacccccgatggttcatggaaaaggaacaagcacga
gcccaagagagagagcttcaaagatatgccagacagcgaaaaatctatactgggcagtct
cgaaacgctccagtcactgatcgtttcgaaggcgacgatatggacttcgacgaagataga
tttgcagatgacgaggaacatgttgggctgtttgatgatgatgaagatgccaaaactgca
gaaaagcgtatcaaacaagaccagctaaaggcaaacatctttgatctcaaagatgaaaag
gactatgatgaagaggagcacctagagaagaaacaaaaggaagatctcaaaagctttggc
aaacaggttcgaaaggcgttgcagcgacgcgagaagaattttgattacagtagcggatct
gatgcaaacccttattctgatgatgagagtacggatgagtccgaactagagcgccaaaag
gaggagcagaaaaagtcggaagaagaccccaagcgaaaagataaccaggctgacaaacct
tcggggacatctaccaaaggcaccaataccccgtctgggcgccctaagcatactgacccg
ctgaagagagcacaagctgccgctcgcaaacgtcctggatccccaaacctctccgacgcc
agtggcacagattcctcccgaaagaaaccgaagaacaagcatctttctgcccaaatctcc
aattctcagcctacctctagacctatttctcctgttccccaagcgcagagaaagagctct
ggtactgctaacgcaaacgatgccacgtccagcactgctcaaaccgctgccggtgcaaag
aagcgtatccgcactgttccaggcaaggctggatctgcaagtgatgttgaaaaagccgcc
aactctggtgctgaaatgagtgatagtactatggcaaagagaatgaagcttaacgttcca
ggtgccaagtcaaagaccggaactccaattggttctcgtgctggaagccctactcctgct
ggcaaagctgtgaccggtagccgggccagcagccccgagagttctcgtggcatttctact
ccctctggttccggatctcgacgagggtcggtctcgggtgccaaccctggtgccggggct
cccccacccgcctctttcccaactgcttctgaaattcacgctgctattcctgcaaacgga
atcttgagcaacgatctcctccgtatgtttcgatcgcgcctcggaaactccagagagaac
catcgtaggttcattgggatcgtcaaggatgtttctgtctttggaaaggaggacaagctg
ttgcgacctggtgttatcaaagaagcttga

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