Trichophyton benhamiae: ARB_06499
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Entry
ARB_06499 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
abe
Trichophyton benhamiae
Pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_06499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abe03041
]
ARB_06499
Spliceosome [BR:
abe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
ARB_06499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_DCAF12
WDR54
Beta-prop_RIG_1st
WD40_like
Motif
Other DBs
NCBI-GeneID:
9521100
NCBI-ProteinID:
XP_003015376
UniProt:
D4AQJ2
LinkDB
All DBs
AA seq
516 aa
AA seq
DB search
MGVDLANIPVDHDYELPSAAAGIAPEKASAILSQFERKRRAAAIAVPTDDGRVKARLREL
GHPITLFGEDSTDRRDRLREVLADLEEQQAAAGEAGAEDVGMGGMEAEEEDQEQEEEFYT
EGSQDLLQARREMARYSIPRAKARVERQKAESTIPLRTHVKHRKAIREKLGHFELYGSQI
AGDRPVSITRFSPNGEIVAAGNWSGGVKLLTVPNLEEKANLRGHTDRIGGISWFPGATLP
ESNVSESSLNLATGGAEGNIRLWSLDKDTSIGTLSGHSDRVCRVEFHPSGKYLASASFDT
TWRLWDVQTNQELLLQEGHSRGVYALGFNTDGSLLASGGLDSIGRIWDLRTGRTVMILEG
HIREIYALDWGIDGHRILSGSGDGWVKCWDLRQVRGTGGVGAHKSVVSDLRWYKGSDAAS
LLPTTSGLDQNGDMMDITPTPAKDQPDQPPQPKKSGTFFVSSGFDKNVNIFSADDWSLVK
SLQGHSGNVLSTDISTDAKWIASCGHDRTVKLWGIE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagtagacctcgcgaatattcccgtggaccatgactacgagcttccctccgctgct
gcgggaatagctcctgagaaagcttctgccatattatctcagttcgaacgaaaacgacga
gcagctgctattgctgtacctacagacgatggacgagtaaaggctcggttgcgggagttg
ggccatccaattaccctattcggcgaagactctacggaccgacgtgacagattgagagaa
gtattagcggacttggaggaacaacaagctgcggctggtgaggctggtgcagaagatgtc
ggcatgggagggatggaagcagaggaggaagaccaagagcaagaggaagaattctacact
gaaggctcacaggacttgctccaggcacggagagagatggcaagatattcaatacccaga
gcaaaggcaagggtagaacggcaaaaggccgaatccaccatacctcttcgaacacacgtt
aagcatagaaaagcaataagggagaaactcggccattttgagctttatggctctcagatt
gctggagaccggcccgtgagcatcaccaggttttccccaaatggagaaatagtggctgca
ggaaattggagcggaggtgtcaagctgcttacagtgccgaatttggaagaaaaagcgaat
ctacgaggacatacagatcgaattggtggcatatcatggttccccggggctacactgccc
gaatcgaatgtctccgaatcgtctttgaatcttgctacaggaggcgcggaagggaatatc
aggctttggtcccttgataaagatacttctattggaactctttctggacactctgaccga
gtatgtcgcgtggaatttcacccatcagggaaataccttgcctctgcatcttttgacacc
acttggcgattatgggatgtacaaacgaaccaggaacttctcctacaagaaggtcactct
cgtggagtctacgcactaggattcaacactgatggctcacttctggctagcggtggcctt
gacagtattggacgtatctgggacttacgcactggtcgaacagttatgatattagagggc
catatccgcgagatatatgcattggattggggaatagacggacaccgtattctgtctgga
tcaggagatggctgggtcaagtgttgggatctccggcaagttcgtggtaccggtggagta
ggtgcacacaagagcgttgtgtcggatctaagatggtacaaggggagcgacgctgcctca
ctcctaccaaccacttcaggacttgatcagaatggggatatgatggatataacacccacg
ccagcgaaggaccaaccagaccaacctccacagcccaaaaaatccggaactttcttcgtt
tctagtggatttgacaagaatgtcaacatctttagtgcggatgactggtcacttgtgaaa
tcgctgcaaggccactccggaaatgttctcagcactgatataagcaccgatgcaaagtgg
atagcaagttgcgggcacgatcgaactgtgaagctatggggtattgaataa
DBGET
integrated database retrieval system