KEGG   Trichophyton benhamiae: ARB_06499
Entry
ARB_06499         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
abe  Trichophyton benhamiae
Pathway
abe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ARB_06499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:abe03041]
    ARB_06499
Spliceosome [BR:abe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    ARB_06499
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd PRP4 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_EML Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_DCAF12 WDR54 Beta-prop_RIG_1st WD40_like
Other DBs
NCBI-GeneID: 9521100
NCBI-ProteinID: XP_003015376
UniProt: D4AQJ2
LinkDB
AA seq 516 aa
MGVDLANIPVDHDYELPSAAAGIAPEKASAILSQFERKRRAAAIAVPTDDGRVKARLREL
GHPITLFGEDSTDRRDRLREVLADLEEQQAAAGEAGAEDVGMGGMEAEEEDQEQEEEFYT
EGSQDLLQARREMARYSIPRAKARVERQKAESTIPLRTHVKHRKAIREKLGHFELYGSQI
AGDRPVSITRFSPNGEIVAAGNWSGGVKLLTVPNLEEKANLRGHTDRIGGISWFPGATLP
ESNVSESSLNLATGGAEGNIRLWSLDKDTSIGTLSGHSDRVCRVEFHPSGKYLASASFDT
TWRLWDVQTNQELLLQEGHSRGVYALGFNTDGSLLASGGLDSIGRIWDLRTGRTVMILEG
HIREIYALDWGIDGHRILSGSGDGWVKCWDLRQVRGTGGVGAHKSVVSDLRWYKGSDAAS
LLPTTSGLDQNGDMMDITPTPAKDQPDQPPQPKKSGTFFVSSGFDKNVNIFSADDWSLVK
SLQGHSGNVLSTDISTDAKWIASCGHDRTVKLWGIE
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgggagtagacctcgcgaatattcccgtggaccatgactacgagcttccctccgctgct
gcgggaatagctcctgagaaagcttctgccatattatctcagttcgaacgaaaacgacga
gcagctgctattgctgtacctacagacgatggacgagtaaaggctcggttgcgggagttg
ggccatccaattaccctattcggcgaagactctacggaccgacgtgacagattgagagaa
gtattagcggacttggaggaacaacaagctgcggctggtgaggctggtgcagaagatgtc
ggcatgggagggatggaagcagaggaggaagaccaagagcaagaggaagaattctacact
gaaggctcacaggacttgctccaggcacggagagagatggcaagatattcaatacccaga
gcaaaggcaagggtagaacggcaaaaggccgaatccaccatacctcttcgaacacacgtt
aagcatagaaaagcaataagggagaaactcggccattttgagctttatggctctcagatt
gctggagaccggcccgtgagcatcaccaggttttccccaaatggagaaatagtggctgca
ggaaattggagcggaggtgtcaagctgcttacagtgccgaatttggaagaaaaagcgaat
ctacgaggacatacagatcgaattggtggcatatcatggttccccggggctacactgccc
gaatcgaatgtctccgaatcgtctttgaatcttgctacaggaggcgcggaagggaatatc
aggctttggtcccttgataaagatacttctattggaactctttctggacactctgaccga
gtatgtcgcgtggaatttcacccatcagggaaataccttgcctctgcatcttttgacacc
acttggcgattatgggatgtacaaacgaaccaggaacttctcctacaagaaggtcactct
cgtggagtctacgcactaggattcaacactgatggctcacttctggctagcggtggcctt
gacagtattggacgtatctgggacttacgcactggtcgaacagttatgatattagagggc
catatccgcgagatatatgcattggattggggaatagacggacaccgtattctgtctgga
tcaggagatggctgggtcaagtgttgggatctccggcaagttcgtggtaccggtggagta
ggtgcacacaagagcgttgtgtcggatctaagatggtacaaggggagcgacgctgcctca
ctcctaccaaccacttcaggacttgatcagaatggggatatgatggatataacacccacg
ccagcgaaggaccaaccagaccaacctccacagcccaaaaaatccggaactttcttcgtt
tctagtggatttgacaagaatgtcaacatctttagtgcggatgactggtcacttgtgaaa
tcgctgcaaggccactccggaaatgttctcagcactgatataagcaccgatgcaaagtgg
atagcaagttgcgggcacgatcgaactgtgaagctatggggtattgaataa

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