Trichophyton benhamiae: ARB_06512
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Entry
ARB_06512 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_06512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abe03041
]
ARB_06512
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ARB_06512
Spliceosome [BR:
abe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
ARB_06512
Complex C
U5 SnRNP specific factors
ARB_06512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
BRR2_plug
ResIII
Helicase_C
AAA_22
PhoH
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
9521113
NCBI-ProteinID:
XP_003015389
UniProt:
D4AQK5
LinkDB
All DBs
AA seq
2231 aa
AA seq
DB search
MADPNNVAQYKYSAMSNLVLQADRRFVTRRADEVTGDPESLAGRLSIKDMGVHAMRPEVK
QKKASAPKDIERGGIREGADVLKREQRKRKRGEQAQLRGVGILSAADALIEGLKYRPRTA
ATRATYDLILTTTASHLGDVPHDVIRSAADAILELLKDENMKDFDKKKEVDDLLGVTMGP
KEFNELVNLGKKITDYDAQDDDETNGAGAEGEDGAELDERQGVAVVFDESDEDEDEMRPD
AEVKDEGESSEDEDMSDEGPPDEGEAAQNIPEDVMGMGDEDMIIDAGAGVAAGKSDADTK
IVPAREIDAYWLQRQIGNIYSDAHVQHEKAQEAFTLMSEQSEDGTPKPLRDVENDLMELF
DYDHPELVGTLVLNRDRIVWTTRWRREAEDSDARRLIENQMIESGNRLLLDELTGKVQDA
TERPGKKMKVDSMDVDTPMAKKEEEDEAKPRTMVGGLPPSKVINLENLVFDQGNHLMTNP
NVKLPQGSTKRTFKGYEEIHVPAPKPRRDDDIRRIPITELPEWSRPGFGNTDKLNLIQSK
CFPTAFNDDGNMLICAPTGSGKTNVAMLTMLREIGKNRNPETGEIMLDDFKIIYIAPLKA
LVQEQVGNFGKRLQHYGIKVSELTGDRQLTKQQIADTQLIVTTPEKWDIITRKATDTSYT
RLVRLVIIDEIHLLHDERGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYRDVGSFLR
VDPIHGLFHFDGTFRPCPLKQEFIGVTDKKAIKQLKTMNDICYTKVLDQVGANKNQMLIF
VHSRKETLKTARYIRDKAVEMETIGQILRSDAASRAILAEEADSVNDPGLKDLMPYGFGI
HHAGMSKADRTSVEDLFADGSLQVLVCTATLAWGVNLPAHCVIIKGTQVYSPEKGSWVEL
SPQDVLQMLGRAGRPQYDSFGEGIIITTQAELQYYLSLLNQQLPIESQLMSKLADNLNAE
IVLGNVRSREEGVEWLGYTYLFVRMLRSPGLYSIGADYEHDTSLEQRRVDLIHSAAMVLE
KSNLVKYDRKTGKLQATELGRIASHYYISHSSMLTYNHHLQPMISTIDLFRIFSLSEEFK
YIPVRQDEKLELAKLLSRVPIPVKESIEEPHAKINVLLQAYISRLKLDGLALMADMVYVT
QSAGRILRAIFEITLRKGWSSVAKTALDLCKMAEKRMWPTMTPLRQFPSCPRDIMQKAER
IDVPWASYFDLDPPRMGELLGIPKAGRIVCDLVSKFPRLELQAQVQPMTRSMLRVELTIT
PNFTWDDSLHGNAEAFWIIVEDCDGEDILFYDQFILRKEYAISEMNEHLVEFTVPITEPM
PPNYFITLLSDRWTHSETKVAVAFQKLILPEKFPPHTPLLDMQPVPVKALRRADYQGLYP
NWEKFNKVQTQVFKALFDSDDNVFVGAPVGSGKTVCAEFAILRHWSKEESRKAVYIAPFQ
ELVDQKLADWTARLTSVAGGKSIQKLTGETTADLKILDRADLVLATPIQWDVISRQWQRR
KNVQAVELFIADDLNILGGQGGYVYEVIVSRMHYISLQTEQELRIVGLSVPLANARDIGE
WLGAKKHTIFNFSPHVRPVPLELHIQSFTIPHFPSLMLAMAKPAYLSILQLSPDKPALIF
VPSRKQARSSALDLFTACVASENEDRFLHADIDEIAPLLDRIEEKALAESISHGIGYYHE
ALSTSDKRIVSHLYKIGALQVMLASRDVCWELDLTAHLVIIMGTQSFDGREHRYIDYPIS
DILQMFGKATRPREDRIGKGVLMVPAVKREYYKKFLNEALPMESHLQLYLHDAFVTEIST
KTITSTQDAVDWMTYSYFYRRLLANPSYYGLTDVSHEGLSTFLSELVENTLKELAEAQIV
DMDEDENISPLNAAMIGAYYNISFITMQTFLLSLSPRTKLKGMLEIVTSATEFESIQVRR
HEDYILRRVYDRVPVKMAEPAFDSPHFKAFVLLQAHFSRLQLPIDLAKDQEIILGKVLNL
LSACVDVLSSKGHLNAMNAMEMSQMVVQSMWDRDSPLMQIPHFGPTAIKAANEFKYVPVN
ISQIKIYRNANNSARIRDIFEFMEAMDPSENKDYSTLVKRLGLDNKQLAQAAAFTNNKYP
NLDLDFTVLEPEEITAGEPAYLKVKIERELDEDEEPDTTVSAPFYPAKKMENWWLVVGEE
KTNSLLSLKRVTVGRKLEMKLEYVVPSPGEHELTLYLMSDSYVGVDQDPTFKITAAEGMD
EDEDEEEEDEE
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccctaataatgtcgcgcagtacaagtactcggcgatgtccaacctggttctc
caggcggatcgccgatttgttactcgccgtgctgatgaggttacgggtgacccagagtcc
ctggcgggccgcctcagtatcaaggatatgggtgtccacgcgatgcgtccagaagtcaag
cagaagaaagcatctgccccaaaagacattgagcgtggagggataagagaaggcgccgac
gtcttgaagcgggaacagcgcaagaggaaacgaggagagcaggcacaacttcgtggtgtg
ggaatattgtccgccgcggatgccctcatcgaaggccttaaataccgaccgcgaacggct
gcaaccagagctacatatgatttgatattgacgacaacggcgagccacctgggtgatgtg
ccgcacgatgtcattcgaagcgccgcggatgccatcctagaactcttgaaggatgagaac
atgaaggatttcgataagaaaaaagaagtggacgatcttctgggtgttactatgggcccg
aaagaattcaatgaactggtaaatcttgggaagaaaattacagactatgacgctcaagac
gacgatgaaacaaatggcgctggcgcagaaggcgaggatggtgccgagctagatgaacgt
cagggtgtggctgtcgtattcgatgaatctgatgaagatgaagatgaaatgcggcccgat
gcagaagttaaagatgaaggagagagtagtgaggacgaagatatgtctgatgagggacca
cccgacgaaggtgaagctgcccagaatatacccgaagacgtcatgggcatgggggatgag
gatatgatcattgacgcaggagccggagtcgccgctggaaaatctgacgccgacactaaa
attgtgcccgcacgcgagatcgatgcatactggctacaacgacagattggaaatatttac
tcagacgctcatgtacaacacgagaaagctcaggaagcttttactctaatgagtgagcag
tcagaggatggtaccccaaagccattgagagacgttgaaaatgacctgatggaactattt
gactatgaccatccagagcttgtcggaaccttggtccttaaccgtgatagaattgtttgg
acgacaaggtggcgaagggaagccgaagatagtgatgccagacgtctcattgaaaaccaa
atgatagaaagtgggaaccgactcctcctcgatgaactaactggcaaggtccaagatgcc
actgagcgacctgggaaaaagatgaaagtcgactcaatggatgttgatactcctatggct
aaaaaggaggaagaggatgaggctaaaccaaggactatggttggtggacttcctccatcg
aaagtcatcaatcttgagaatttggtttttgaccagggtaatcatctaatgaccaatccc
aatgttaaacttcctcaaggctccacgaagcgaacattcaagggctacgaggagattcat
gttccggcacccaaacccagacgtgatgacgacatcaggaggataccaataactgagctt
ccagaatggtcccggccaggtttcggcaacaccgacaagttgaacttgattcagtcaaaa
tgttttcccacagcctttaatgacgacggtaacatgctgatttgcgctcccactggatct
ggaaaaactaatgtggctatgcttacgatgctccgtgaaattgggaaaaatagaaacccg
gaaactggtgaaatcatgcttgacgacttcaaaatcatttacatagctccattgaaagcc
ctggttcaagagcaagtagggaattttgggaaacgtctccaacactatggcatcaaagtt
tctgagctcactggtgaccgtcaattaactaaacagcagatagcagatacccaacttatt
gtcacaactccagaaaagtgggatatcataacaagaaaagcaaccgacactagctatact
cgcctagttagactcgtcattatcgatgaaatccatctgcttcacgatgagcgtggtcct
gtactggaaagcatcgtcagtcgaactatacgaaagacagagcaaactggagaacccgtt
cgcttagtcggacttagtgcgactcttccaaactatcgtgatgttggcagttttctacgt
gttgaccccatccacgggctgttccattttgatggtacctttcgaccatgcccactaaag
caagaatttatcggtgttacggacaagaaggccattaagcaattgaaaacaatgaacgat
atttgctacaccaaagtcctagaccaagtaggtgcgaacaaaaaccaaatgctgatattt
gtccattcacgaaaggaaacccttaaaacagcaaggtatatccgagataaagcagttgag
atggaaactattgggcaaattttacgaagcgatgctgccagccgtgctatcttggctgaa
gaggctgactcagtgaatgatcccggactgaaagacctgatgccatacggatttggaatc
catcatgctgggatgagcaaagcggatcggacatctgttgaagatctgtttgcagatggt
agtttgcaagtccttgtctgtaccgctacgcttgcgtggggtgtcaatttacccgcgcat
tgtgttataattaagggaactcaagtctactctcctgaaaaaggcagctgggtagagctt
agcccccaggatgtccttcagatgcttgggcgagcaggtcggccccagtacgactcattt
ggcgagggtataataatcaccacacaggcggagcttcagtattacttgtcactactcaat
caacagttacccattgaaagtcagcttatgagtaagcttgccgacaatctcaatgctgag
atcgttctagggaatgttcggtctcgtgaagaaggagtggaatggcttggctacacctat
ttgtttgtcagaatgcttcgttctcctggactttatagcatcggcgccgattatgaacac
gacacctcgcttgagcagcgccgtgtggatcttattcactctgcggcgatggtcctggag
aaatccaaccttgtcaagtacgacaggaaaacaggcaaactccaggctactgagctcggt
cgcatcgcatctcactattatatctctcacagctcgatgctcacatataaccatcatcta
cagcccatgatttctaccattgatttattccgaatcttctcgctgagtgaggaattcaag
tatatccctgttcgacaagacgagaagttggaattggcaaagttgttgagcagagtccct
attcctgtcaaggagagcattgaggaaccgcacgccaaaatcaatgtgttgctacaagct
tatatttcacgcctaaagctagatgggctcgctttaatggctgacatggtgtatgtcacc
caatctgccggtcgaatcctccgtgctatattcgagattactctccggaagggttggtcc
tctgttgcaaaaacagcgctggatctttgcaaaatggctgaaaagcggatgtggccaacc
atgactccccttcgccaattcccaagctgccctcgggatattatgcagaaggctgaacgg
attgacgtcccctgggcaagctactttgatctagacccaccacgaatgggtgaacttcta
ggcattcctaaagctggacgtattgtatgtgaccttgtttcaaaattcccccgccttgag
ctgcaggcacaggtacagccaatgactcgctcgatgctccgtgttgagttgactatcaca
cctaatttcacctgggatgattcgctgcacggaaatgcagaagcattctggattatcgtc
gaggattgtgatggagaagacattctcttctatgaccagtttatactcaggaaagagtat
gcaatctcggaaatgaacgaacatctcgttgaattcaccgttccaatcaccgagcccatg
ccacccaactatttcattactctactttctgatcgctggacacattcagaaaccaaggtt
gccgttgcgttccagaaattgattcttcccgagaaattccctccgcatactccactcttg
gatatgcagcctgttcctgtcaaagctttgagacgggcagattaccagggtctatatccc
aactgggagaaatttaataaagtccaaacccaagtattcaaagcactctttgattcagac
gacaatgtattcgttggtgcccccgtgggaagcggaaagacagtatgcgccgaattcgcc
attcttaggcattggtccaaggaagaatcgcggaaggcagtatatatcgctccattccag
gaacttgtggatcaaaaacttgctgattggaccgctcgcctgacaagtgttgctggtggt
aagtcaatccagaaacttactggagagactaccgccgacctcaagatccttgatcgggca
gatctcgtacttgcgacacctatacagtgggacgtcatttctcgacagtggcagagacgc
aagaatgtccaagctgtcgagctcttcattgcagatgatctgaacattcttggagggcaa
ggaggttatgtatatgaagtcatcgtttcacgaatgcattatatctcccttcaaaccgaa
caagaactgcggatagtcgggcttagcgttccgttggcaaacgcccgcgacattggagaa
tggcttggagcaaagaagcataccattttcaattttagccctcatgtccggccggttcct
ctggaactgcatattcaatctttcacgataccccatttcccatcccttatgctcgctatg
gcgaagcctgcatacctatccattttacaactttcacctgacaagccggcgttgatattc
gtaccaagtcgcaagcaagctcgatcgagtgctctcgatctattcactgcctgtgttgct
agtgagaatgaagaccgattcttgcatgccgatattgatgagatagctcctctactcgac
cggatcgaggaaaaagcattggcggaatcgatatctcacggtatcggttattaccacgag
gccttgagtacaagcgataaacgaatcgtttctcacctctacaagattggcgctcttcag
gttatgcttgcttctcgggatgtatgctgggagcttgaccttacggctcatctcgtcatc
atcatgggaactcaatcatttgacggccgcgaacaccgatatatcgattacccaattagc
gacattctccagatgtttggcaaagccacgcgacctcgtgaagataggatcggcaaaggt
gtcctgatggttcctgctgtaaagcgtgaatattataaaaaattcctcaacgaagcactg
cctatggagagtcatctgcagctttatcttcatgatgcgtttgtgacggaaataagcacg
aaaacaatcacgtctactcaagatgctgtcgactggatgacttattcatatttctacaga
cgacttctcgccaaccctagttattacggtcttaccgatgttagccatgagggactgagt
actttcttatcggaacttgttgagaatacccttaaggagctggctgaagcacaaattgtt
gacatggatgaggacgaaaacatctctcctctgaacgctgccatgattggtgcctattat
aacatctccttcatcactatgcagaccttccttctttcgctttctcccagaacgaaactt
aagggtatgcttgaaattgtgacttctgctacagaattcgagtccattcaagtacgacgc
catgaagactacattcttcgcagagtttacgatcgagtccctgtcaaaatggccgagcct
gcctttgactcgccacatttcaaagcatttgttcttctccaagcacatttttcacgtctc
cagctaccaattgaccttgcaaaggaccaagaaatcatccttggcaaggttcttaacctc
cttagtgcctgcgtcgatgtcctttcatctaagggccatctgaatgccatgaatgccatg
gagatgtcgcagatggttgtccagtcgatgtgggatagagatagtccgctaatgcagatt
ccccacttcggtccaactgctattaaggctgctaatgagttcaagtatgtccctgttaat
atctcacaaatcaaaatttatagaaatgctaacaacagtgctaggattcgtgacatcttt
gaatttatggaggctatggacccatcggagaacaaagactacagcacccttgtcaagcgt
ctcggccttgacaacaaacagctcgcccaggctgctgcctttaccaacaacaaatacccg
aacctggacctcgactttactgtccttgaaccagaagagatcactgctggtgaaccagcc
tatctcaaggtgaagatcgagcgagagctagatgaggatgaggaaccggataccacggta
tctgctccattctatcctgcaaagaaaatggagaactggtggctagtggttggcgaggag
aaaacgaacagcttactctctctcaagagggtgactgttggtcggaagttggagatgaag
cttgaatatgtcgtgcctagccccggagaacatgagttgacgctctacctcatgagtgac
agctatgtcggcgtggaccaagaccctacctttaagataacagctgctgagggtatggat
gaggatgaagacgaggaagaggaagatgaggagtag
DBGET
integrated database retrieval system
